VTR

7 main matches found (10 matches in total )

Execution time: 10.0 seconds

Match RMSD = 0.0

VTR = 0.0

Average AVD = 0.0 Å

Parameters

Chains(7K9Z.pdb ): E versus L

Chains(7K9Z_brazil_mut.pdb ) E versus L

Cutoff: 2 Å

Detection of structural contacts in α-helices OFF

Contacts found Number of residues Hydrophobic Attractive Hydrogen Bonds Disulphide Bonds Repulsive Aromatic Stacking Total
A7K9Z 1041 3 0 7 0 0 0 10
B7K9Z_brazil_mut 1041 3 0 7 0 0 0 10

Matches

(Conservatives hydrophobic matches are hidden by default)

Chains Residues Contact types
A B A1 A2 B1 B2 A [1-2] B [1-2] AVD Contact
L-E L-E F94 I468 F94 I468 Hydrophobic Hydrophobic 0.0 View
L-E L-E Q27 R357 Q27 R357 Hydrogen Bonds Hydrogen Bonds 0.0 View
L-E L-E F94 I468 F94 I468 Hydrophobic Hydrophobic 0.0 View
L-E L-E N32 R466 N32 R466 Hydrogen Bonds Hydrogen Bonds 0.0 View
L-E L-E Q27 R357 Q27 R357 Hydrogen Bonds Hydrogen Bonds 0.0 View
L-E L-E S0 R355 S0 R355 Hydrogen Bonds Hydrogen Bonds 0.0 View
L-E L-E S30 E465 S30 E465 Hydrogen Bonds Hydrogen Bonds 0.0 View
L-E L-E F94 I468 F94 I468 Hydrophobic Hydrophobic 0.0 View
L-E L-E N92 R466 N92 R466 Hydrogen Bonds Hydrogen Bonds 0.0 View
L-E L-E S0 R357 S0 R357 Hydrogen Bonds Hydrogen Bonds 0.0 View

Colorscheme: Purple/Yellow | Cyan/Green

Contacts: 7K9Z | 7K9Z_brazil_mut | All matches | Unmatched
Download Pymol files

Unmatched Contacts

Protein Chains Residue1 Residue2 Contact types Distance Contact

Contact Maps

AVD Frequency

Detailed Graphs

Residue Match Frequency View
GLU
ALA
TYR
THR
LEU
SER
PHE
GLY
MET
PRO
LYS
VAL
HIS
ILE
CYS
ARG
GLN
ASP
ASN
TRP

Graph