VTR

18 main matches found (44 matches in total )

Execution time: 10.0 seconds

Match RMSD = 0.0

VTR = 0.0

Average AVD = 0.0 Å

Parameters

Chains(7EAM.pdb ): A versus H

Chains(7EAM_brazil_mut.pdb ) A versus H

Cutoff: 2 Å

Detection of structural contacts in α-helices OFF

Contacts found Number of residues Hydrophobic Attractive Hydrogen Bonds Disulphide Bonds Repulsive Aromatic Stacking Total
A7EAM 1266 26 2 16 0 0 0 44
B7EAM_brazil_mut 1266 26 2 16 0 0 0 44

Matches

(Conservatives hydrophobic matches are hidden by default)

Chains Residues Contact types
A B A1 A2 B1 B2 A [1-2] B [1-2] AVD Contact
A-H A-H Y396 Y102 Y396 Y102 Hydrophobic Hydrophobic 0.0 View
A-H A-H R466 D31 R466 D31 Hydrogen Bonds Hydrogen Bonds 0.0 View
A-H A-H R466 D31 R466 D31 Hydrogen Bonds Hydrogen Bonds 0.0 View
A-H A-H A352 D31 A352 D31 Hydrophobic Hydrophobic 0.0 View
A-H A-H T470 F27 T470 F27 Hydrogen Bonds Hydrogen Bonds 0.0 View
A-H A-H R355 V103 R355 V103 Hydrophobic Hydrophobic 0.0 View
A-H A-H T470 G26 T470 G26 Hydrogen Bonds Hydrogen Bonds 0.0 View
A-H A-H I468 T32 I468 T32 Hydrophobic Hydrophobic 0.0 View
A-H A-H W353 V103 W353 V103 Hydrophobic Hydrophobic 0.0 View
A-H A-H R466 V103 R466 V103 Hydrophobic Hydrophobic 0.0 View
A-H A-H R357 Y102 R357 Y102 Hydrophobic Hydrophobic 0.0 View
A-H A-H R355 Y100 R355 Y100 Hydrogen Bonds Hydrogen Bonds 0.0 View
A-H A-H I468 F27 I468 F27 Hydrophobic Hydrophobic 0.0 View
A-H A-H R346 G54 R346 G54 Hydrogen Bonds Hydrogen Bonds 0.0 View
A-H A-H E471 E1 E471 E1 Hydrogen Bonds Hydrogen Bonds 0.0 View
A-H A-H R355 Y102 R355 Y102 Hydrophobic Hydrophobic 0.0 View
A-H A-H R346 G54 R346 G54 Hydrogen Bonds Hydrogen Bonds 0.0 View
A-H A-H I468 D31 I468 D31 Hydrophobic Hydrophobic 0.0 View
A-H A-H W353 V103 W353 V103 Hydrophobic Hydrophobic 0.0 View
A-H A-H Y351 D31 Y351 D31 Hydrogen Bonds Hydrogen Bonds 0.0 View
A-H A-H I468 F27 I468 F27 Hydrophobic Hydrophobic 0.0 View
A-H A-H I468 D31 I468 D31 Hydrophobic Hydrophobic 0.0 View
A-H A-H Y351 K30 Y351 K30 Hydrogen Bonds Hydrogen Bonds 0.0 View
A-H A-H I468 D31 I468 D31 Hydrophobic Hydrophobic 0.0 View
A-H A-H R357 Y102 R357 Y102 Hydrophobic Hydrophobic 0.0 View
A-H A-H W353 V103 W353 V103 Hydrophobic Hydrophobic 0.0 View
A-H A-H R355 Y100 R355 Y100 Hydrophobic Hydrophobic 0.0 View
A-H A-H W353 V103 W353 V103 Hydrophobic Hydrophobic 0.0 View
A-H A-H R355 V103 R355 V103 Hydrophobic Hydrophobic 0.0 View
A-H A-H R466 D31 R466 D31 Attractive Attractive 0.0 View
A-H A-H N354 Y100 N354 Y100 Hydrogen Bonds Hydrogen Bonds 0.0 View
A-H A-H Y351 D31 Y351 D31 Hydrogen Bonds Hydrogen Bonds 0.0 View
A-H A-H R346 D55 R346 D55 Attractive Attractive 0.0 View
A-H A-H T470 G26 T470 G26 Hydrogen Bonds Hydrogen Bonds 0.0 View
A-H A-H S469 G26 S469 G26 Hydrogen Bonds Hydrogen Bonds 0.0 View
A-H A-H Y396 Y102 Y396 Y102 Hydrophobic Hydrophobic 0.0 View
A-H A-H R357 Y102 R357 Y102 Hydrophobic Hydrophobic 0.0 View
A-H A-H W353 V103 W353 V103 Hydrophobic Hydrophobic 0.0 View
A-H A-H I468 F27 I468 F27 Hydrophobic Hydrophobic 0.0 View
A-H A-H R355 Y102 R355 Y102 Hydrogen Bonds Hydrogen Bonds 0.0 View
A-H A-H I468 F27 I468 F27 Hydrophobic Hydrophobic 0.0 View
A-H A-H Y396 Y102 Y396 Y102 Hydrophobic Hydrophobic 0.0 View
A-H A-H R355 Y100 R355 Y100 Hydrogen Bonds Hydrogen Bonds 0.0 View
A-H A-H Y396 Y102 Y396 Y102 Hydrophobic Hydrophobic 0.0 View

Colorscheme: Purple/Yellow | Cyan/Green

Contacts: 7EAM | 7EAM_brazil_mut | All matches | Unmatched
Download Pymol files

Unmatched Contacts

Protein Chains Residue1 Residue2 Contact types Distance Contact

Contact Maps

AVD Frequency

Detailed Graphs

Residue Match Frequency View
GLU
ALA
TYR
THR
LEU
SER
PHE
GLY
MET
PRO
LYS
VAL
HIS
ILE
CYS
ARG
GLN
ASP
ASN
TRP

Graph