VTR

15 main matches found (15 matches in total )

Execution time: 11.0 seconds

Match RMSD = 0.0

VTR = 0.0

Average AVD = 0.0 Å

Parameters

Chains(7DEO.pdb ): B versus C

Chains(7DEO_brazil_mut.pdb ) B versus C

Cutoff: 2 Å

Detection of structural contacts in α-helices OFF

Contacts found Number of residues Hydrophobic Attractive Hydrogen Bonds Disulphide Bonds Repulsive Aromatic Stacking Total
A7DEO 871 0 7 4 0 5 0 16
B7DEO_brazil_mut 871 0 7 4 0 5 0 16

Matches

(Conservatives hydrophobic matches are hidden by default)

Chains Residues Contact types
A B A1 A2 B1 B2 A [1-2] B [1-2] AVD Contact
B-C B-C K356 R217 K356 R217 Repulsive Repulsive 0.0 View
B-C B-C K356 R217 K356 R217 Repulsive Repulsive 0.0 View
B-C B-C R357 D200 R357 D200 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-C B-C K356 S216 K356 S216 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-C B-C K356 D200 K356 D200 Attractive Attractive 0.0 View
B-C B-C R357 R201 R357 R201 Repulsive Repulsive 0.0 View
B-C B-C K356 R217 K356 R217 Repulsive Repulsive 0.0 View
B-C B-C R357 D200 R357 D200 Attractive Attractive 0.0 View
B-C B-C R357 E219 R357 E219 Attractive Attractive 0.0 View
B-C B-C K356 D200 K356 D200 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-C B-C K356 R217 K356 R217 Repulsive Repulsive 0.0 View
B-C B-C E340 R217 E340 R217 Attractive Attractive 0.0 View
B-C B-C E340 R217 E340 R217 Attractive Attractive 0.0 View
B-C B-C E340 R217 E340 R217 Attractive Attractive 0.0 View
B-C B-C K356 D200 K356 D200 Attractive Hydrogen Bonds Attractive Hydrogen Bonds 0.0 View

Colorscheme: Purple/Yellow | Cyan/Green

Contacts: 7DEO | 7DEO_brazil_mut | All matches | Unmatched
Download Pymol files

Unmatched Contacts

Protein Chains Residue1 Residue2 Contact types Distance Contact

Contact Maps

AVD Frequency

Detailed Graphs

Residue Match Frequency View
GLU
ALA
TYR
THR
LEU
SER
PHE
GLY
MET
PRO
LYS
VAL
HIS
ILE
CYS
ARG
GLN
ASP
ASN
TRP

Graph