VTR
30 main matches found
(55 matches in total )Execution time: 10.0 seconds
Match RMSD = 0.48
VTR = 0.0
Average AVD = 0.14 Å
Parameters
Chains(7CJF.pdb ): C versus A
Chains(7CJF_brazil_mut.pdb ) C versus A
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
| Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
|---|---|---|---|---|---|---|---|---|
| A7CJF | 627 | 27 | 3 | 23 | 0 | 4 | 1 | 58 |
| B7CJF_brazil_mut | 622 | 25 | 1 | 24 | 0 | 4 | 1 | 55 |
Matches
(Conservatives hydrophobic matches are hidden by default)
| Chains | Residues | Contact types | |||||||
|---|---|---|---|---|---|---|---|---|---|
| A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
| A-C | A-C | Y33 | K417 | Y33 | T417 | Hydrophobic | Hydrogen Bonds | 1.59 | View |
| A-C | A-C | S53 | R457 | S53 | R457 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-C | A-C | S30 | K458 | S30 | K458 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-C | A-C | S53 | K458 | S53 | K458 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-C | A-C | R71 | K458 | R71 | K458 | Repulsive | Repulsive | 0.0 | View |
| A-C | A-C | Y107 | F486 | Y107 | F486 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-C | A-C | S56 | D420 | S56 | D420 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-C | A-C | R71 | K458 | R71 | K458 | Repulsive | Repulsive | 0.0 | View |
| A-C | A-C | Y52 | Y421 | Y52 | Y421 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-C | A-C | N32 | A475 | N32 | A475 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-C | A-C | Y107 | F486 | Y107 | F486 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-C | A-C | Y107 | F486 | Y107 | F486 | Aromatic Stacking | Aromatic Stacking | 0.0 | View |
| A-C | A-C | E101 | Y453 | E101 | Y453 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-C | A-C | F27 | F486 | F27 | F486 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-C | A-C | Y107 | F486 | Y107 | F486 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-C | A-C | S53 | Y421 | S53 | Y421 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-C | A-C | R97 | N487 | R97 | N487 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-C | A-C | L102 | Y489 | L102 | Y489 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-C | A-C | Y33 | K417 | Y33 | L455 | Hydrophobic | Hydrophobic | 1.87 | View |
| A-C | A-C | Y107 | F486 | Y107 | F486 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-C | A-C | L99 | Y489 | L99 | Y489 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-C | A-C | Y33 | F456 | Y33 | F456 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-C | A-C | Y33 | F456 | Y33 | F456 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-C | A-C | Q100 | K417 | Q100 | T417 | Hydrogen Bonds | Hydrogen Bonds | 1.86 | View |
| A-C | A-C | S56 | D420 | S56 | D420 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-C | A-C | Y33 | L455 | Y33 | L455 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-C | A-C | L102 | F456 | L102 | F456 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-C | A-C | R71 | K458 | R71 | K458 | Repulsive | Repulsive | 0.0 | View |
| A-C | A-C | I28 | A475 | I28 | A475 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-C | A-C | L99 | Y489 | L99 | Y489 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-C | A-C | F27 | F486 | F27 | F486 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-C | A-C | Q100 | L455 | Q100 | L455 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-C | A-C | S31 | Y473 | S31 | Y473 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-C | A-C | S53 | Y473 | S53 | Y473 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-C | A-C | E101 | Y453 | E101 | Y453 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-C | A-C | E101 | Q493 | E101 | Q493 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-C | A-C | R97 | N487 | R97 | N487 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-C | A-C | R97 | Y489 | R97 | Y489 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-C | A-C | R71 | K458 | R71 | K458 | Repulsive | Repulsive | 0.0 | View |
| A-C | A-C | L102 | Y489 | L102 | Y489 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-C | A-C | E101 | R403 | E101 | R403 | Attractive | Attractive | 0.0 | View |
| A-C | A-C | G54 | N460 | G54 | N460 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-C | A-C | G54 | K458 | G54 | K458 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-C | A-C | L99 | F456 | L99 | F456 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-C | A-C | L102 | L455 | L102 | L455 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-C | A-C | Y52 | K417 | Y52 | T417 | Hydrophobic | Hydrogen Bonds | 1.58 | View |
| A-C | A-C | G54 | Y421 | G54 | Y421 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-C | A-C | S53 | Y421 | S53 | Y421 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-C | A-C | Q100 | L455 | Q100 | L455 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-C | A-C | L102 | F456 | L102 | F456 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-C | A-C | L102 | L455 | L102 | L455 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-C | A-C | Y52 | K417 | Y52 | T417 | Hydrophobic | Hydrophobic | 0.77 | View |
| A-C | A-C | L102 | Y489 | L102 | Y489 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-C | A-C | Y33 | L455 | Y33 | L455 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-C | A-C | G26 | S477 | G26 | S477 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |