VTR

19 main matches found (22 matches in total )

Execution time: 11.0 seconds

Match RMSD = 0.39

VTR = 0.0

Average AVD = 0.08 Å

Parameters

Chains(7CHF.pdb ): R versus L

Chains(7CHF_brazil_mut.pdb ) R versus L

Cutoff: 2 Å

Detection of structural contacts in α-helices OFF

Contacts found Number of residues Hydrophobic Attractive Hydrogen Bonds Disulphide Bonds Repulsive Aromatic Stacking Total
A7CHF 1052 3 2 14 0 4 0 23
B7CHF_brazil_mut 1052 3 2 15 0 4 0 24

Matches

(Conservatives hydrophobic matches are hidden by default)

Chains Residues Contact types
A B A1 A2 B1 B2 A [1-2] B [1-2] AVD Contact
L-R L-R D94 D405 D94 D405 Repulsive Repulsive 0.0 View
L-R L-R D94 D405 D94 D405 Repulsive Repulsive 0.0 View
L-R L-R Q27 G502 Q27 G502 Hydrogen Bonds Hydrogen Bonds 0.0 View
L-R L-R I2 Y505 I2 Y505 Hydrophobic Hydrophobic 0.0 View
L-R L-R G28 G502 G28 G502 Hydrogen Bonds Hydrogen Bonds 0.0 View
L-R L-R Q90 Y505 Q90 Y505 Hydrogen Bonds Hydrogen Bonds 0.0 View
L-R L-R S67 Q498 S67 Q498 Hydrogen Bonds Hydrogen Bonds 0.0 View
L-R L-R D94 R403 D94 R403 Attractive Attractive 0.0 View
L-R L-R N92 R403 N92 R403 Hydrogen Bonds Hydrogen Bonds 0.0 View
L-R L-R N92 R403 N92 R403 Hydrogen Bonds Hydrogen Bonds 0.0 View
L-R L-R N92 Y453 N92 Y453 Hydrogen Bonds Hydrogen Bonds 0.0 View
L-R L-R S67 Q498 S67 Q498 Hydrogen Bonds Hydrogen Bonds 0.0 View
L-R L-R N92 Y453 N92 Y453 Hydrogen Bonds Hydrogen Bonds 0.0 View
L-R L-R D32 R403 D32 R403 Attractive Attractive 0.0 View
L-R L-R I2 Y505 I2 Y505 Hydrophobic Hydrophobic 0.0 View
L-R L-R I29 Y505 I29 Y505 Hydrophobic Hydrophobic 0.0 View
L-R L-R S30 Q498 S30 Q498 Hydrogen Bonds Hydrogen Bonds 0.0 View
L-R L-R S30 G496 S30 G496 Hydrogen Bonds Hydrogen Bonds 0.0 View
L-R L-R Q27 V503 Q27 V503 Hydrogen Bonds Hydrogen Bonds 0.0 View
L-R L-R D94 D405 D94 D405 Repulsive Repulsive 0.0 View
L-R L-R S30 N501 S30 Y501 Hydrogen Bonds Hydrogen Bonds 1.84 View
L-R L-R D94 D405 D94 D405 Repulsive Repulsive 0.0 View

Colorscheme: Purple/Yellow | Cyan/Green

Contacts: 7CHF | 7CHF_brazil_mut | All matches | Unmatched
Download Pymol files

Unmatched Contacts

Protein Chains Residue1 Residue2 Contact types Distance Contact
7CHF L-R N92 K417 Hydrogen Bonds 3.44 View
7CHF_brazil_mut L-R S30 Y501 Hydrogen Bonds 3.82 View
7CHF_brazil_mut L-R G68 Y501 Hydrogen Bonds 2.91 View

Contact Maps

AVD Frequency

Detailed Graphs

Residue Match Frequency View
GLU
ALA
TYR
THR
LEU
SER
PHE
GLY
MET
PRO
LYS
VAL
HIS
ILE
CYS
ARG
GLN
ASP
ASN
TRP

Graph