VTR

14 main matches found (22 matches in total )

Execution time: 30.0 seconds

Match RMSD = 0.0

VTR = 0.0

Average AVD = 0.0 Å

Parameters

Chains(7CAK.pdb ): B versus G

Chains(7CAK_brazil_mut.pdb ) B versus G

Cutoff: 2 Å

Detection of structural contacts in α-helices OFF

Contacts found Number of residues Hydrophobic Attractive Hydrogen Bonds Disulphide Bonds Repulsive Aromatic Stacking Total
A7CAK 3771 8 0 11 0 3 0 22
B7CAK_brazil_mut 3771 8 0 11 0 3 0 22

Matches

(Conservatives hydrophobic matches are hidden by default)

Chains Residues Contact types
A B A1 A2 B1 B2 A [1-2] B [1-2] AVD Contact
B-G B-G R408 Y101 R408 Y101 Hydrophobic Hydrophobic 0.0 View
B-G B-G F377 Y50 F377 Y50 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-G B-G K378 T58 K378 T58 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-G B-G R408 D102 R408 D102 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-G B-G S383 T69 S383 T69 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-G B-G Y369 L62 Y369 L62 Hydrophobic Hydrophobic 0.0 View
B-G B-G R408 Y101 R408 Y101 Hydrophobic Hydrophobic 0.0 View
B-G B-G T385 K65 T385 K65 Hydrophobic Hydrophobic 0.0 View
B-G B-G F377 Y50 F377 Y50 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-G B-G D405 D102 D405 D102 Repulsive Repulsive 0.0 View
B-G B-G T385 L62 T385 L62 Hydrophobic Hydrophobic 0.0 View
B-G B-G T376 Y50 T376 Y50 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-G B-G T385 K65 T385 K65 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-G B-G D405 D102 D405 D102 Repulsive Repulsive 0.0 View
B-G B-G K378 G56 K378 G56 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-G B-G V503 P103 V503 P103 Hydrophobic Hydrophobic 0.0 View
B-G B-G D405 D102 D405 D102 Repulsive Repulsive 0.0 View
B-G B-G Q414 Y101 Q414 Y101 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-G B-G P384 D60 P384 D60 Hydrophobic Hydrophobic 0.0 View
B-G B-G F377 S59 F377 S59 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-G B-G K378 T58 K378 T58 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-G B-G R408 Y101 R408 Y101 Hydrophobic Hydrophobic 0.0 View

Colorscheme: Purple/Yellow | Cyan/Green

Contacts: 7CAK | 7CAK_brazil_mut | All matches | Unmatched
Download Pymol files

Unmatched Contacts

Protein Chains Residue1 Residue2 Contact types Distance Contact

Contact Maps

AVD Frequency

Detailed Graphs

Residue Match Frequency View
GLU
ALA
TYR
THR
LEU
SER
PHE
GLY
MET
PRO
LYS
VAL
HIS
ILE
CYS
ARG
GLN
ASP
ASN
TRP

Graph