VTR

6 main matches found (15 matches in total )

Execution time: 31.0 seconds

Match RMSD = 0.07

VTR = 0.0

Average AVD = 0.02 Å

Parameters

Chains(7CAI.pdb ): C versus G

Chains(7CAI_brazil_mut.pdb ) C versus G

Cutoff: 2 Å

Detection of structural contacts in α-helices OFF

Contacts found Number of residues Hydrophobic Attractive Hydrogen Bonds Disulphide Bonds Repulsive Aromatic Stacking Total
A7CAI 3911 9 0 6 0 0 0 15
B7CAI_brazil_mut 3909 9 0 6 0 0 0 15

Matches

(Conservatives hydrophobic matches are hidden by default)

Chains Residues Contact types
A B A1 A2 B1 B2 A [1-2] B [1-2] AVD Contact
C-G C-G F486 T71 F486 T71 Hydrophobic Hydrophobic 0.0 View
C-G C-G T478 T71 T478 T71 Hydrophobic Hydrophobic 0.0 View
C-G C-G P479 K19 P479 K19 Hydrogen Bonds Hydrogen Bonds 0.0 View
C-G C-G V483 T76 V483 T76 Hydrophobic Hydrophobic 0.0 View
C-G C-G F486 D73 F486 D73 Hydrogen Bonds Hydrogen Bonds 0.0 View
C-G C-G P479 K19 P479 K19 Hydrophobic Hydrophobic 0.0 View
C-G C-G T478 E82 T478 E82 Hydrophobic Hydrophobic 0.0 View
C-G C-G P479 K19 P479 K19 Hydrophobic Hydrophobic 0.0 View
C-G C-G V483 T76 V483 T76 Hydrophobic Hydrophobic 0.0 View
C-G C-G F486 T71 F486 T71 Hydrophobic Hydrophobic 0.0 View
C-G C-G T478 T71 T478 T71 Hydrogen Bonds Hydrogen Bonds 0.0 View
C-G C-G N481 K19 N481 K19 Hydrogen Bonds Hydrogen Bonds 0.0 View
C-G C-G V483 T76 V483 T76 Hydrophobic Hydrophobic 0.0 View
C-G C-G E484 S75 K484 S75 Hydrogen Bonds Hydrogen Bonds 0.29 View
C-G C-G G485 S75 G485 S75 Hydrogen Bonds Hydrogen Bonds 0.0 View

Colorscheme: Purple/Yellow | Cyan/Green

Contacts: 7CAI | 7CAI_brazil_mut | All matches | Unmatched
Download Pymol files

Unmatched Contacts

Protein Chains Residue1 Residue2 Contact types Distance Contact

Contact Maps

AVD Frequency

Detailed Graphs

Residue Match Frequency View
GLU
ALA
TYR
THR
LEU
SER
PHE
GLY
MET
PRO
LYS
VAL
HIS
ILE
CYS
ARG
GLN
ASP
ASN
TRP

Graph