VTR
22 main matches found
(58 matches in total )Execution time: 6.0 seconds
Match RMSD = 0.21
VTR = 0.0
Average AVD = 0.05 Å
Parameters
Chains(7C8W.pdb ): B versus A
Chains(7C8W_brazil_mut.pdb ) B versus A
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
| Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
|---|---|---|---|---|---|---|---|---|
| A7C8W | 315 | 36 | 7 | 19 | 0 | 0 | 2 | 64 |
| B7C8W_brazil_mut | 315 | 37 | 0 | 18 | 0 | 3 | 3 | 61 |
Matches
(Conservatives hydrophobic matches are hidden by default)
| Chains | Residues | Contact types | |||||||
|---|---|---|---|---|---|---|---|---|---|
| A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
| A-B | A-B | Y37 | F486 | Y37 | F486 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-B | A-B | A50 | F486 | A50 | F486 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-B | A-B | V31 | Y449 | V31 | Y449 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-B | A-B | H56 | F490 | H56 | F490 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-B | A-B | W32 | Y449 | W32 | Y449 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-B | A-B | V31 | S494 | V31 | S494 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-B | A-B | D101 | L455 | D101 | L455 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-B | A-B | V31 | Y449 | V31 | Y449 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-B | A-B | V31 | Y449 | V31 | Y449 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-B | A-B | V31 | Y449 | V31 | Y449 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-B | A-B | V31 | Y449 | V31 | Y449 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-B | A-B | V31 | Y449 | V31 | Y449 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-B | A-B | Y37 | F486 | Y37 | F486 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-B | A-B | K99 | Y489 | K99 | Y489 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-B | A-B | R59 | C488 | R59 | C488 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-B | A-B | R33 | F486 | R33 | F486 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-B | A-B | V31 | Y449 | V31 | Y449 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-B | A-B | H56 | F490 | H56 | F490 | Aromatic Stacking | Aromatic Stacking | 0.0 | View |
| A-B | A-B | R33 | C488 | R33 | C488 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-B | A-B | E35 | F486 | E35 | F486 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-B | A-B | V31 | Y449 | V31 | Y449 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-B | A-B | K99 | Y489 | K99 | Y489 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-B | A-B | Y60 | E484 | Y60 | K484 | Hydrogen Bonds | Hydrogen Bonds | 0.34 | View |
| A-B | A-B | Y37 | F486 | Y37 | F486 | Aromatic Stacking | Aromatic Stacking | 0.0 | View |
| A-B | A-B | E35 | F486 | E35 | F486 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-B | A-B | Y54 | S494 | Y54 | S494 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-B | A-B | A50 | F486 | A50 | F486 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-B | A-B | W32 | Y449 | W32 | Y449 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-B | A-B | K99 | Q493 | K99 | Q493 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-B | A-B | V31 | Y449 | V31 | Y449 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-B | A-B | Y37 | F486 | Y37 | F486 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-B | A-B | D101 | Y453 | D101 | Y453 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-B | A-B | R33 | F486 | R33 | F486 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-B | A-B | V31 | Y449 | V31 | Y449 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-B | A-B | P28 | Y449 | P28 | Y449 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-B | A-B | Y37 | F486 | Y37 | F486 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-B | A-B | W32 | S494 | W32 | S494 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-B | A-B | H56 | F490 | H56 | F490 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-B | A-B | V31 | Y449 | V31 | Y449 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-B | A-B | R59 | C488 | R59 | C488 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-B | A-B | E52 | F490 | E52 | F490 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-B | A-B | R59 | E484 | R59 | K484 | Attractive | Repulsive | 0.9 | View |
| A-B | A-B | Q103 | Y453 | Q103 | Y453 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-B | A-B | Y54 | Y449 | Y54 | Y449 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-B | A-B | D101 | Y453 | D101 | Y453 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-B | A-B | Y37 | F486 | Y37 | F486 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-B | A-B | H56 | F490 | H56 | F490 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-B | A-B | R59 | E484 | R59 | K484 | Attractive | Repulsive | 0.9 | View |
| A-B | A-B | D100 | Q493 | D100 | Q493 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-B | A-B | H56 | F490 | H56 | F490 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-B | A-B | R33 | Y489 | R33 | Y489 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-B | A-B | V31 | Y449 | V31 | Y449 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-B | A-B | E35 | F486 | E35 | F486 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-B | A-B | D101 | Q493 | D101 | Q493 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-B | A-B | E52 | F490 | E52 | F490 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-B | A-B | Q103 | Y453 | Q103 | Y453 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-B | A-B | R59 | E484 | R59 | K484 | Attractive | Repulsive | 0.9 | View |
| A-B | A-B | E35 | F486 | E35 | F486 | Hydrophobic | Hydrophobic | 0.0 | View |