VTR

26 main matches found (57 matches in total )

Execution time: 37.0 seconds

Match RMSD = 0.0

VTR = 0.0

Average AVD = 0.0 Å

Parameters

Chains(7C2L.pdb ): B versus I

Chains(7C2L_brazil_mut.pdb ) B versus I

Cutoff: 2 Å

Detection of structural contacts in α-helices OFF

Contacts found Number of residues Hydrophobic Attractive Hydrogen Bonds Disulphide Bonds Repulsive Aromatic Stacking Total
A7C2L 4479 31 13 16 0 0 1 61
B7C2L_brazil_mut 4479 31 13 16 0 0 1 61

Matches

(Conservatives hydrophobic matches are hidden by default)

Chains Residues Contact types
A B A1 A2 B1 B2 A [1-2] B [1-2] AVD Contact
B-I B-I Y145 V102 Y145 V102 Hydrophobic Hydrophobic 0.0 View
B-I B-I L249 T100 L249 T100 Hydrophobic Hydrophobic 0.0 View
B-I B-I W152 P106 W152 P106 Hydrophobic Hydrophobic 0.0 View
B-I B-I W152 F109 W152 F109 Hydrophobic Hydrophobic 0.0 View
B-I B-I K150 Y111 K150 Y111 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-I B-I Y145 V102 Y145 V102 Hydrophobic Hydrophobic 0.0 View
B-I B-I Y145 V102 Y145 V102 Hydrophobic Hydrophobic 0.0 View
B-I B-I Y145 V102 Y145 V102 Hydrophobic Hydrophobic 0.0 View
B-I B-I H146 T30 H146 T30 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-I B-I S247 Y27 S247 Y27 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-I B-I W152 F109 W152 F109 Aromatic Stacking Aromatic Stacking 0.0 View
B-I B-I R246 E31 R246 E31 Attractive Attractive 0.0 View
B-I B-I Y248 G104 Y248 G104 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-I B-I K150 E54 K150 E54 Attractive Attractive 0.0 View
B-I B-I H146 T30 H146 T30 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-I B-I W152 F109 W152 F109 Hydrophobic Hydrophobic 0.0 View
B-I B-I Y145 A101 Y145 A101 Hydrophobic Hydrophobic 0.0 View
B-I B-I Y248 Y27 Y248 Y27 Hydrophobic Hydrophobic 0.0 View
B-I B-I W152 V102 W152 V102 Hydrophobic Hydrophobic 0.0 View
B-I B-I Y145 V102 Y145 V102 Hydrophobic Hydrophobic 0.0 View
B-I B-I Y248 Y27 Y248 Y27 Hydrophobic Hydrophobic 0.0 View
B-I B-I Y248 E31 Y248 E31 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-I B-I K150 E54 K150 E54 Attractive Hydrogen Bonds Attractive Hydrogen Bonds 0.0 View
B-I B-I R246 E31 R246 E31 Attractive Attractive 0.0 View
B-I B-I K147 E72 K147 E72 Attractive Hydrogen Bonds Attractive Hydrogen Bonds 0.0 View
B-I B-I W152 P106 W152 P106 Hydrophobic Hydrophobic 0.0 View
B-I B-I W152 P106 W152 P106 Hydrophobic Hydrophobic 0.0 View
B-I B-I H146 T30 H146 T30 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-I B-I L249 A103 L249 A103 Hydrophobic Hydrophobic 0.0 View
B-I B-I H245 P106 H245 P106 Hydrophobic Hydrophobic 0.0 View
B-I B-I K147 L29 K147 L29 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-I B-I K147 E72 K147 E72 Attractive Hydrogen Bonds Attractive Hydrogen Bonds 0.0 View
B-I B-I K147 T30 K147 T30 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-I B-I Y248 V102 Y248 V102 Hydrophobic Hydrophobic 0.0 View
B-I B-I Y145 V102 Y145 V102 Hydrophobic Hydrophobic 0.0 View
B-I B-I Y248 V102 Y248 V102 Hydrophobic Hydrophobic 0.0 View
B-I B-I Y145 V102 Y145 V102 Hydrophobic Hydrophobic 0.0 View
B-I B-I L249 Y112 L249 Y112 Hydrophobic Hydrophobic 0.0 View
B-I B-I R246 E31 R246 E31 Attractive Attractive 0.0 View
B-I B-I W152 P106 W152 P106 Hydrophobic Hydrophobic 0.0 View
B-I B-I R246 E31 R246 E31 Attractive Attractive 0.0 View
B-I B-I R246 E31 R246 E31 Attractive Attractive 0.0 View
B-I B-I R246 E31 R246 E31 Attractive Attractive 0.0 View
B-I B-I V143 P106 V143 P106 Hydrophobic Hydrophobic 0.0 View
B-I B-I Y145 A101 Y145 A101 Hydrophobic Hydrophobic 0.0 View
B-I B-I W152 P106 W152 P106 Hydrophobic Hydrophobic 0.0 View
B-I B-I Y248 Y27 Y248 Y27 Hydrophobic Hydrophobic 0.0 View
B-I B-I R246 E31 R246 E31 Attractive Attractive 0.0 View
B-I B-I W152 P106 W152 P106 Hydrophobic Hydrophobic 0.0 View
B-I B-I K150 P53 K150 P53 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-I B-I R246 E31 R246 E31 Attractive Hydrogen Bonds Attractive Hydrogen Bonds 0.0 View
B-I B-I R246 G26 R246 G26 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-I B-I W152 P106 W152 P106 Hydrophobic Hydrophobic 0.0 View
B-I B-I Y145 V102 Y145 V102 Hydrophobic Hydrophobic 0.0 View
B-I B-I K147 L32 K147 L32 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-I B-I K147 F51 K147 F51 Hydrophobic Hydrophobic 0.0 View
B-I B-I R246 E1 R246 E1 Attractive Attractive 0.0 View

Colorscheme: Purple/Yellow | Cyan/Green

Contacts: 7C2L | 7C2L_brazil_mut | All matches | Unmatched
Download Pymol files

Unmatched Contacts

Protein Chains Residue1 Residue2 Contact types Distance Contact

Contact Maps

AVD Frequency

Detailed Graphs

Residue Match Frequency View
GLU
ALA
TYR
THR
LEU
SER
PHE
GLY
MET
PRO
LYS
VAL
HIS
ILE
CYS
ARG
GLN
ASP
ASN
TRP

Graph