VTR

13 main matches found (47 matches in total )

Execution time: 11.0 seconds

Match RMSD = 0.0

VTR = 0.0

Average AVD = 0.0 Å

Parameters

Chains(7BEP.pdb ): E versus H

Chains(7BEP_brazil_mut.pdb ) E versus H

Cutoff: 2 Å

Detection of structural contacts in α-helices OFF

Contacts found Number of residues Hydrophobic Attractive Hydrogen Bonds Disulphide Bonds Repulsive Aromatic Stacking Total
A7BEP 2175 34 2 13 0 0 0 49
B7BEP_brazil_mut 2175 34 2 13 0 0 0 49

Matches

(Conservatives hydrophobic matches are hidden by default)

Chains Residues Contact types
A B A1 A2 B1 B2 A [1-2] B [1-2] AVD Contact
E-H E-H T345 S109 T345 S109 Hydrogen Bonds Hydrogen Bonds 0.0 View
E-H E-H G339 Y100 G339 Y100 Hydrogen Bonds Hydrogen Bonds 0.0 View
E-H E-H K356 F106 K356 F106 Hydrophobic Hydrophobic 0.0 View
E-H E-H P337 W105 P337 W105 Hydrophobic Hydrophobic 0.0 View
E-H E-H T345 S109 T345 S109 Hydrogen Bonds Hydrogen Bonds 0.0 View
E-H E-H P337 W105 P337 W105 Hydrophobic Hydrophobic 0.0 View
E-H E-H K356 F106 K356 F106 Hydrophobic Hydrophobic 0.0 View
E-H E-H K356 F106 K356 F106 Hydrophobic Hydrophobic 0.0 View
E-H E-H N343 Y100 N343 Y100 Hydrophobic Hydrophobic 0.0 View
E-H E-H L441 I111 L441 I111 Hydrophobic Hydrophobic 0.0 View
E-H E-H E340 A104 E340 A104 Hydrogen Bonds Hydrogen Bonds 0.0 View
E-H E-H L335 W105 L335 W105 Hydrogen Bonds Hydrogen Bonds 0.0 View
E-H E-H P337 W105 P337 W105 Hydrophobic Hydrophobic 0.0 View
E-H E-H E340 L110 E340 L110 Hydrophobic Hydrophobic 0.0 View
E-H E-H P337 W105 P337 W105 Hydrophobic Hydrophobic 0.0 View
E-H E-H P337 F106 P337 F106 Hydrophobic Hydrophobic 0.0 View
E-H E-H C361 W105 C361 W105 Hydrophobic Hydrophobic 0.0 View
E-H E-H P337 W105 P337 W105 Hydrophobic Hydrophobic 0.0 View
E-H E-H L335 P28 L335 P28 Hydrophobic Hydrophobic 0.0 View
E-H E-H K356 F106 K356 F106 Hydrophobic Hydrophobic 0.0 View
E-H E-H P337 W105 P337 W105 Hydrophobic Hydrophobic 0.0 View
E-H E-H E340 W105 E340 W105 Hydrogen Bonds Hydrogen Bonds 0.0 View
E-H E-H P337 W105 P337 W105 Hydrophobic Hydrophobic 0.0 View
E-H E-H E340 L110 E340 L110 Hydrophobic Hydrophobic 0.0 View
E-H E-H T345 S109 T345 S109 Hydrogen Bonds Hydrogen Bonds 0.0 View
E-H E-H E340 F106 E340 F106 Hydrophobic Hydrophobic 0.0 View
E-H E-H L335 P28 L335 P28 Hydrophobic Hydrophobic 0.0 View
E-H E-H L335 P28 L335 P28 Hydrophobic Hydrophobic 0.0 View
E-H E-H E340 F106 E340 F106 Hydrogen Bonds Hydrogen Bonds 0.0 View
E-H E-H N334 W105 N334 W105 Hydrophobic Hydrophobic 0.0 View
E-H E-H K356 E108 K356 E108 Attractive Hydrogen Bonds Attractive Hydrogen Bonds 0.0 View
E-H E-H K356 F106 K356 F106 Hydrophobic Hydrophobic 0.0 View
E-H E-H N343 Y100 N343 Y100 Hydrogen Bonds Hydrogen Bonds 0.0 View
E-H E-H P337 F106 P337 F106 Hydrophobic Hydrophobic 0.0 View
E-H E-H K356 F106 K356 F106 Hydrophobic Hydrophobic 0.0 View
E-H E-H E340 F106 E340 F106 Hydrophobic Hydrophobic 0.0 View
E-H E-H C361 W105 C361 W105 Hydrophobic Hydrophobic 0.0 View
E-H E-H K356 E108 K356 E108 Attractive Hydrogen Bonds Attractive Hydrogen Bonds 0.0 View
E-H E-H N343 I111 N343 I111 Hydrogen Bonds Hydrogen Bonds 0.0 View
E-H E-H K356 F106 K356 F106 Hydrophobic Hydrophobic 0.0 View
E-H E-H N334 T30 N334 T30 Hydrophobic Hydrophobic 0.0 View
E-H E-H P337 F106 P337 F106 Hydrophobic Hydrophobic 0.0 View
E-H E-H E340 L110 E340 L110 Hydrophobic Hydrophobic 0.0 View
E-H E-H P337 W105 P337 W105 Hydrophobic Hydrophobic 0.0 View
E-H E-H P337 W105 P337 W105 Hydrophobic Hydrophobic 0.0 View
E-H E-H T345 I111 T345 I111 Hydrophobic Hydrophobic 0.0 View
E-H E-H E340 W105 E340 W105 Hydrogen Bonds Hydrogen Bonds 0.0 View

Colorscheme: Purple/Yellow | Cyan/Green

Contacts: 7BEP | 7BEP_brazil_mut | All matches | Unmatched
Download Pymol files

Unmatched Contacts

Protein Chains Residue1 Residue2 Contact types Distance Contact

Contact Maps

AVD Frequency

Detailed Graphs

Residue Match Frequency View
GLU
ALA
TYR
THR
LEU
SER
PHE
GLY
MET
PRO
LYS
VAL
HIS
ILE
CYS
ARG
GLN
ASP
ASN
TRP

Graph