VTR
14 main matches found
(37 matches in total )Execution time: 32.0 seconds
Match RMSD = 0.0
VTR = 0.0
Average AVD = 0.0 Å
Parameters
Chains(6ZDH.pdb ): A versus H
Chains(6ZDH_brazil_mut.pdb ) A versus H
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
| Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
|---|---|---|---|---|---|---|---|---|
| A6ZDH | 4308 | 23 | 4 | 11 | 0 | 0 | 1 | 39 |
| B6ZDH_brazil_mut | 4308 | 23 | 4 | 11 | 0 | 0 | 1 | 39 |
Matches
(Conservatives hydrophobic matches are hidden by default)
| Chains | Residues | Contact types | |||||||
|---|---|---|---|---|---|---|---|---|---|
| A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
| A-H | A-H | K386 | V105 | K386 | V105 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-H | A-H | L390 | W104 | L390 | W104 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | T385 | N57 | T385 | N57 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | S383 | Y106 | S383 | Y106 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-H | A-H | F392 | W104 | F392 | W104 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | K386 | L103 | K386 | L103 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-H | A-H | T385 | Y59 | T385 | Y59 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | T385 | V50 | T385 | V50 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | F377 | Y59 | F377 | Y59 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | P384 | Y59 | P384 | Y59 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | V382 | W104 | V382 | W104 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | F392 | W104 | F392 | W104 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | T385 | Y106 | T385 | Y106 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-H | A-H | D389 | Y53 | D389 | Y53 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-H | A-H | L390 | W104 | L390 | W104 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | L390 | W104 | L390 | W104 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | L517 | W104 | L517 | W104 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | K386 | D99 | K386 | D99 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 0.0 | View |
| A-H | A-H | P384 | Y59 | P384 | Y59 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | F392 | W104 | F392 | W104 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | F392 | W104 | F392 | W104 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | F377 | Y59 | F377 | Y59 | Aromatic Stacking | Aromatic Stacking | 0.0 | View |
| A-H | A-H | T385 | Y106 | T385 | Y106 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-H | A-H | V382 | W104 | V382 | W104 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | K386 | D99 | K386 | D99 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 0.0 | View |
| A-H | A-H | L517 | W104 | L517 | W104 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | S383 | W104 | S383 | W104 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-H | A-H | P384 | Y59 | P384 | Y59 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | L390 | W104 | L390 | W104 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | T385 | Y59 | T385 | Y59 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | F392 | W104 | F392 | W104 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | K386 | D33 | K386 | D33 | Attractive | Attractive | 0.0 | View |
| A-H | A-H | K529 | D54 | K529 | D54 | Attractive | Attractive | 0.0 | View |
| A-H | A-H | P384 | Y59 | P384 | Y59 | Hydrophobic | Hydrophobic | 0.0 | View |
| A-H | A-H | S383 | W104 | S383 | W104 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-H | A-H | T385 | D33 | T385 | D33 | Hydrogen Bonds | Hydrogen Bonds | 0.0 | View |
| A-H | A-H | L390 | W104 | L390 | W104 | Hydrophobic | Hydrophobic | 0.0 | View |