VTR

18 main matches found (18 matches in total )

Execution time: 9.0 seconds

Match RMSD = 0.0

VTR = 0.0

Average AVD = 0.0 Å

Parameters

Chains(6XKP.pdb ): B versus M

Chains(6XKP_brazil_mut.pdb ) B versus M

Cutoff: 2 Å

Detection of structural contacts in α-helices OFF

Contacts found Number of residues Hydrophobic Attractive Hydrogen Bonds Disulphide Bonds Repulsive Aromatic Stacking Total
A6XKP 1213 0 8 12 0 0 0 20
B6XKP_brazil_mut 1213 0 8 12 0 0 0 20

Matches

(Conservatives hydrophobic matches are hidden by default)

Chains Residues Contact types
A B A1 A2 B1 B2 A [1-2] B [1-2] AVD Contact
B-M B-M R346 D31 R346 D31 Attractive Hydrogen Bonds Attractive Hydrogen Bonds 0.0 View
B-M B-M K444 D31 K444 D31 Attractive Attractive 0.0 View
B-M B-M R346 D31 R346 D31 Attractive Attractive 0.0 View
B-M B-M G447 S98 G447 S98 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-M B-M N450 S98 N450 S98 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-M B-M K444 T28 K444 T28 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-M B-M N450 D31 N450 D31 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-M B-M R346 D31 R346 D31 Attractive Attractive 0.0 View
B-M B-M R346 D31 R346 D31 Attractive Attractive 0.0 View
B-M B-M R346 D31 R346 D31 Attractive Attractive 0.0 View
B-M B-M N450 G100 N450 G100 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-M B-M N448 S98 N448 S98 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-M B-M K444 D31 K444 D31 Attractive Hydrogen Bonds Attractive Hydrogen Bonds 0.0 View
B-M B-M N450 S99 N450 S99 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-M B-M N450 S98 N450 S98 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-M B-M N450 S98 N450 S98 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-M B-M Y449 S98 Y449 S98 Hydrogen Bonds Hydrogen Bonds 0.0 View
B-M B-M R346 D31 R346 D31 Attractive Attractive 0.0 View

Colorscheme: Purple/Yellow | Cyan/Green

Contacts: 6XKP | 6XKP_brazil_mut | All matches | Unmatched
Download Pymol files

Unmatched Contacts

Protein Chains Residue1 Residue2 Contact types Distance Contact

Contact Maps

AVD Frequency

Detailed Graphs

Residue Match Frequency View
GLU
ALA
TYR
THR
LEU
SER
PHE
GLY
MET
PRO
LYS
VAL
HIS
ILE
CYS
ARG
GLN
ASP
ASN
TRP

Graph