Execution time: 35.0 seconds
Match RMSD = 0.69
VTR = 0.04
Average AVD = 0.63 Å
Chains(7NTC.pdb ): C versus L
Chains(7NTC_africa_mut.pdb ) C versus L
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7NTC | 3698 | 9 | 0 | 12 | 0 | 2 | 1 | 24 |
B7NTC_africa_mut | 3689 | 12 | 0 | 15 | 0 | 2 | 0 | 29 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
C-L | C-L | K97 | H110 | K97 | H110 | Repulsive | Repulsive Hydrogen Bonds | 0.47 | View |
C-L | C-L | K97 | H110 | K97 | H110 | Repulsive | Repulsive | 0.44 | View |
C-L | C-L | A260 | N72 | A260 | N72 | Hydrogen Bonds | Hydrogen Bonds | 0.54 | View |
C-L | C-L | K97 | Y51 | K97 | Y51 | Hydrophobic | Hydrophobic | 0.63 | View |
C-L | C-L | S71 | G85 | S71 | G85 | Hydrogen Bonds | Hydrogen Bonds | 0.21 | View |
C-L | C-L | L249 | T75 | L249 | T75 | Hydrophobic | Hydrophobic | 0.85 | View |
C-L | C-L | A260 | N72 | A260 | N72 | Hydrogen Bonds | Hydrogen Bonds | 0.45 | View |
C-L | C-L | S247 | L73 | S247 | L73 | Hydrogen Bonds | Hydrogen Bonds | 1.45 | View |
C-L | C-L | K97 | Y51 | K97 | Y51 | Hydrophobic | Hydrophobic | 0.5 | View |
C-L | C-L | S71 | G85 | S71 | G85 | Hydrogen Bonds | Hydrogen Bonds | 0.35 | View |
C-L | C-L | S71 | G85 | S71 | G85 | Hydrogen Bonds | Hydrogen Bonds | 0.37 | View |
C-L | C-L | V213 | D47 | V213 | D47 | Hydrophobic | Hydrophobic | 0.23 | View |
C-L | C-L | K97 | Y51 | K97 | Y51 | Hydrophobic | Hydrophobic | 0.64 | View |
C-L | C-L | T259 | N72 | T259 | N72 | Hydrophobic | Hydrophobic | 1.25 | View |
C-L | C-L | N185 | D111 | N185 | D111 | Hydrogen Bonds | Hydrogen Bonds | 0.52 | View |
C-L | C-L | T259 | N72 | T259 | N72 | Hydrogen Bonds | Hydrogen Bonds | 0.73 | View |
C-L | C-L | K97 | Y51 | K97 | Y51 | Hydrogen Bonds | Hydrogen Bonds | 0.59 | View |
C-L | C-L | K97 | Y51 | K97 | Y51 | Hydrophobic | Hydrophobic | 0.57 | View |
C-L | C-L | Y248 | T75 | Y248 | T75 | Hydrogen Bonds | Hydrogen Bonds | 0.79 | View |
C-L | C-L | T259 | S71 | T259 | S71 | Hydrogen Bonds | Hydrogen Bonds | 0.89 | View |
C-L | C-L | K97 | Y51 | K97 | Y51 | Hydrophobic | Hydrophobic | 0.68 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7NTC | C-L | H245 | Y68 | Aromatic Stacking | 5.90 | View |
7NTC | C-L | H245 | Y68 | Hydrogen Bonds | 3.31 | View |
7NTC | C-L | L249 | T75 | Hydrophobic | 3.84 | View |
7NTC_africa_mut | C-L | K97 | H110 | Hydrogen Bonds | 3.86 | View |
7NTC_africa_mut | C-L | N185 | S112 | Hydrogen Bonds | 3.87 | View |
7NTC_africa_mut | C-L | L249 | L73 | Hydrophobic | 4.46 | View |
7NTC_africa_mut | C-L | L249 | L73 | Hydrophobic | 3.85 | View |
7NTC_africa_mut | C-L | L249 | L73 | Hydrophobic | 3.32 | View |
7NTC_africa_mut | C-L | L249 | L73 | Hydrophobic | 2.94 | View |
7NTC_africa_mut | C-L | T259 | N72 | Hydrogen Bonds | 3.86 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |