Execution time: 39.0 seconds
Match RMSD = 0.5
VTR = 0.02
Average AVD = 0.46 Å
Chains(7NTC.pdb ): C versus H
Chains(7NTC_africa_mut.pdb ) C versus H
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7NTC | 3698 | 8 | 0 | 16 | 0 | 8 | 1 | 33 |
B7NTC_africa_mut | 3689 | 10 | 0 | 15 | 0 | 1 | 1 | 27 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
C-H | C-H | Q183 | Y78 | Q183 | Y78 | Hydrogen Bonds | Hydrogen Bonds | 0.29 | View |
C-H | C-H | K97 | N126 | K97 | N126 | Hydrogen Bonds | Hydrogen Bonds | 0.53 | View |
C-H | C-H | W152 | Y51 | W152 | Y51 | Hydrophobic | Hydrophobic | 0.7 | View |
C-H | C-H | K97 | S125 | K97 | S125 | Hydrogen Bonds | Hydrogen Bonds | 0.43 | View |
C-H | C-H | K150 | F46 | K150 | F46 | Hydrophobic | Hydrophobic | 0.25 | View |
C-H | C-H | W152 | Y131 | W152 | Y131 | Hydrogen Bonds | Hydrogen Bonds | 0.39 | View |
C-H | C-H | K97 | S125 | K97 | S125 | Hydrogen Bonds | Hydrogen Bonds | 0.26 | View |
C-H | C-H | K182 | I77 | K182 | I77 | Hydrogen Bonds | Hydrogen Bonds | 0.17 | View |
C-H | C-H | S98 | S124 | S98 | S124 | Hydrogen Bonds | Hydrogen Bonds | 0.48 | View |
C-H | C-H | K150 | S47 | K150 | S47 | Hydrogen Bonds | Hydrogen Bonds | 1.05 | View |
C-H | C-H | W152 | Y131 | W152 | Y131 | Aromatic Stacking | Aromatic Stacking | 0.35 | View |
C-H | C-H | E180 | Y76 | E180 | Y76 | Hydrogen Bonds | Hydrogen Bonds | 0.39 | View |
C-H | C-H | W152 | Y51 | W152 | Y51 | Hydrophobic | Hydrophobic | 0.65 | View |
C-H | C-H | N185 | N126 | N185 | N126 | Hydrogen Bonds | Hydrogen Bonds | 0.43 | View |
C-H | C-H | T124 | Y122 | T124 | Y122 | Hydrophobic | Hydrophobic | 0.42 | View |
C-H | C-H | A123 | P121 | A123 | P121 | Hydrophobic | Hydrophobic | 0.27 | View |
C-H | C-H | S151 | Y131 | S151 | Y131 | Hydrogen Bonds | Hydrogen Bonds | 0.51 | View |
C-H | C-H | E180 | D123 | E180 | D123 | Repulsive | Repulsive | 0.52 | View |
C-H | C-H | W152 | Y51 | W152 | Y51 | Hydrophobic | Hydrophobic | 0.66 | View |
C-H | C-H | K97 | S125 | K97 | S125 | Hydrogen Bonds | Hydrogen Bonds | 0.59 | View |
C-H | C-H | W152 | Y131 | W152 | Y131 | Hydrophobic | Hydrophobic | 0.41 | View |
C-H | C-H | W152 | Y131 | W152 | Y131 | Hydrophobic | Hydrophobic | 0.69 | View |
C-H | C-H | N185 | N126 | N185 | N126 | Hydrogen Bonds | Hydrogen Bonds | 0.39 | View |
C-H | C-H | W152 | D130 | W152 | D130 | Hydrogen Bonds | Hydrogen Bonds | 0.29 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7NTC | C-H | H245 | R119 | Repulsive | 5.46 | View |
7NTC | C-H | H245 | R119 | Repulsive | 5.51 | View |
7NTC | C-H | H245 | R119 | Repulsive | 4.43 | View |
7NTC | C-H | H245 | R119 | Repulsive | 4.91 | View |
7NTC | C-H | H245 | R119 | Repulsive | 3.63 | View |
7NTC | C-H | H245 | R119 | Repulsive, Hydrogen Bonds | 3.44 | View |
7NTC | C-H | H245 | R119 | Repulsive, Hydrogen Bonds | 2.94 | View |
7NTC_africa_mut | C-H | W152 | Y51 | Hydrogen Bonds | 3.05 | View |
7NTC_africa_mut | C-H | K182 | Y76 | Hydrophobic | 4.28 | View |
7NTC_africa_mut | C-H | K182 | Y76 | Hydrophobic | 4.36 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |