Execution time: 11.0 seconds
Match RMSD = 0.62
VTR = 0.02
Average AVD = 0.48 Å
Chains(7NEH.pdb ): E versus L
Chains(7NEH_africa_mut.pdb ) E versus L
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7NEH | 630 | 13 | 0 | 22 | 0 | 0 | 1 | 36 |
B7NEH_africa_mut | 630 | 18 | 0 | 22 | 0 | 0 | 1 | 41 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
L-E | L-E | S30 | Q498 | S30 | Q498 | Hydrogen Bonds | Hydrogen Bonds | 0.46 | View |
L-E | L-E | Y32 | Y505 | Y32 | Y505 | Hydrophobic | Hydrophobic | 0.37 | View |
L-E | L-E | Y32 | S494 | Y32 | S494 | Hydrogen Bonds | Hydrogen Bonds | 0.21 | View |
L-E | L-E | Y32 | Y505 | Y32 | Y505 | Hydrophobic | Hydrophobic | 0.35 | View |
L-E | L-E | G28 | T500 | G28 | T500 | Hydrogen Bonds | Hydrogen Bonds | 0.64 | View |
L-E | L-E | Y32 | Y505 | Y32 | Y505 | Hydrophobic | Hydrophobic | 0.35 | View |
L-E | L-E | Y32 | Y505 | Y32 | Y505 | Hydrophobic | Hydrophobic | 0.31 | View |
L-E | L-E | Y94 | D405 | Y94 | D405 | Hydrophobic | Hydrophobic | 0.17 | View |
L-E | L-E | S67 | Q498 | S67 | Q498 | Hydrogen Bonds | Hydrogen Bonds | 0.39 | View |
L-E | L-E | Q90 | Y505 | Q90 | Y505 | Hydrogen Bonds | Hydrogen Bonds | 0.26 | View |
L-E | L-E | Y32 | Y505 | Y32 | Y505 | Hydrophobic | Hydrophobic | 0.35 | View |
L-E | L-E | Y32 | Y505 | Y32 | Y505 | Hydrophobic | Hydrophobic | 0.38 | View |
L-E | L-E | Y94 | D405 | Y94 | D405 | Hydrophobic | Hydrophobic | 0.19 | View |
L-E | L-E | I2 | Y505 | I2 | Y505 | Hydrophobic | Hydrophobic | 0.55 | View |
L-E | L-E | I29 | Y505 | I29 | Y505 | Hydrophobic | Hydrophobic | 0.5 | View |
L-E | L-E | N92 | R403 | N92 | R403 | Hydrogen Bonds | Hydrogen Bonds | 0.24 | View |
L-E | L-E | Y94 | R408 | Y94 | R408 | Hydrogen Bonds | Hydrogen Bonds | 0.35 | View |
L-E | L-E | S30 | N501 | S30 | Q498 | Hydrogen Bonds | Hydrogen Bonds | 1.87 | View |
L-E | L-E | Y32 | Y505 | Y32 | Y505 | Aromatic Stacking | Aromatic Stacking | 0.24 | View |
L-E | L-E | N92 | Y505 | N92 | Y505 | Hydrogen Bonds | Hydrogen Bonds | 0.3 | View |
L-E | L-E | G28 | G502 | G28 | G502 | Hydrogen Bonds | Hydrogen Bonds | 1.37 | View |
L-E | L-E | I2 | Y505 | I2 | Y505 | Hydrophobic | Hydrophobic | 0.55 | View |
L-E | L-E | N92 | R403 | N92 | R403 | Hydrogen Bonds | Hydrogen Bonds | 0.31 | View |
L-E | L-E | N92 | R403 | N92 | R403 | Hydrogen Bonds | Hydrogen Bonds | 0.34 | View |
L-E | L-E | I29 | Y505 | I29 | Y501 | Hydrophobic | Hydrophobic | 1.75 | View |
L-E | L-E | N92 | Y453 | N92 | Y453 | Hydrogen Bonds | Hydrogen Bonds | 0.25 | View |
L-E | L-E | Y94 | R408 | Y94 | R408 | Hydrogen Bonds | Hydrogen Bonds | 0.26 | View |
L-E | L-E | S93 | Y505 | S93 | Y505 | Hydrogen Bonds | Hydrogen Bonds | 0.18 | View |
L-E | L-E | S67 | Q498 | S67 | Q498 | Hydrogen Bonds | Hydrogen Bonds | 0.45 | View |
L-E | L-E | L91 | Y505 | L91 | Y505 | Hydrogen Bonds | Hydrogen Bonds | 0.21 | View |
L-E | L-E | S30 | G496 | S30 | G496 | Hydrogen Bonds | Hydrogen Bonds | 0.6 | View |
L-E | L-E | I29 | Y505 | I29 | Y505 | Hydrophobic | Hydrophobic | 0.66 | View |
L-E | L-E | Y32 | Y495 | Y32 | Y495 | Hydrogen Bonds | Hydrogen Bonds | 0.32 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7NEH | L-E | S30 | N501 | Hydrogen Bonds | 3.55 | View |
7NEH | L-E | S30 | N501 | Hydrogen Bonds | 2.64 | View |
7NEH | L-E | N92 | K417 | Hydrogen Bonds | 3.17 | View |
7NEH_africa_mut | L-E | I2 | Y501 | Hydrophobic | 4.38 | View |
7NEH_africa_mut | L-E | I2 | Y501 | Hydrophobic | 4.42 | View |
7NEH_africa_mut | L-E | I2 | Y501 | Hydrophobic | 3.17 | View |
7NEH_africa_mut | L-E | Q27 | Y501 | Hydrophobic | 4.19 | View |
7NEH_africa_mut | L-E | Q27 | Y501 | Hydrophobic | 3.64 | View |
7NEH_africa_mut | L-E | Q27 | Y501 | Hydrogen Bonds | 3.09 | View |
7NEH_africa_mut | L-E | Q27 | V503 | Hydrogen Bonds | 3.62 | View |
7NEH_africa_mut | L-E | G28 | Y501 | Hydrogen Bonds | 3.50 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |