Execution time: 27.0 seconds
Match RMSD = 0.47
VTR = 0.02
Average AVD = 0.43 Å
Chains(7NDD.pdb ): C versus D
Chains(7NDD_africa_mut.pdb ) C versus D
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7NDD | 3852 | 1 | 3 | 4 | 0 | 0 | 1 | 9 |
B7NDD_africa_mut | 3843 | 4 | 3 | 5 | 0 | 0 | 1 | 13 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
C-D | C-D | K147 | G56 | K147 | G56 | Hydrogen Bonds | Hydrogen Bonds | 0.23 | View |
C-D | C-D | D253 | Y108 | D253 | Y108 | Hydrogen Bonds | Hydrogen Bonds | 0.77 | View |
C-D | C-D | Y144 | Y53 | Y144 | Y53 | Hydrophobic | Hydrophobic | 0.28 | View |
C-D | C-D | H146 | D54 | H146 | D54 | Attractive | Attractive | 0.57 | View |
C-D | C-D | H146 | D54 | H146 | D54 | Attractive | Attractive | 0.21 | View |
C-D | C-D | Y144 | Y53 | Y144 | Y53 | Aromatic Stacking | Aromatic Stacking | 0.18 | View |
C-D | C-D | K147 | N57 | K147 | N57 | Hydrogen Bonds | Hydrogen Bonds | 0.47 | View |
C-D | C-D | H146 | D54 | H146 | D54 | Attractive | Attractive | 0.6 | View |
C-D | C-D | Q14 | Y32 | Q14 | Y32 | Hydrogen Bonds | Hydrogen Bonds | 0.53 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |