Execution time: 61.0 seconds
Match RMSD = 0.48
VTR = 0.01
Average AVD = 0.47 Å
Chains(7NDB.pdb ): B versus H
Chains(7NDB_africa_mut.pdb ) B versus H
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7NDB | 3460 | 3 | 0 | 4 | 0 | 0 | 0 | 7 |
B7NDB_africa_mut | 3455 | 4 | 0 | 4 | 0 | 0 | 0 | 8 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
B-H | B-H | Y489 | V52 | Y489 | V52 | Hydrophobic | Hydrophobic | 0.43 | View |
B-H | B-H | Y473 | T104 | Y473 | T104 | Hydrogen Bonds | Hydrogen Bonds | 0.55 | View |
B-H | B-H | F486 | P99 | F486 | P99 | Hydrophobic | Hydrophobic | 0.47 | View |
B-H | B-H | A475 | C106 | A475 | C106 | Hydrogen Bonds | Hydrogen Bonds | 0.39 | View |
B-H | B-H | A475 | S105 | A475 | S105 | Hydrogen Bonds | Hydrogen Bonds | 0.56 | View |
B-H | B-H | Y473 | T104 | Y473 | T104 | Hydrogen Bonds | Hydrogen Bonds | 0.49 | View |
B-H | B-H | Y489 | V52 | Y489 | V52 | Hydrophobic | Hydrophobic | 0.42 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7NDB_africa_mut | B-H | Y489 | V52 | Hydrophobic | 4.43 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |