Execution time: 51.0 seconds
Match RMSD = 0.51
VTR = 0.0
Average AVD = 0.49 Å
Chains(7ND9.pdb ): B versus L
Chains(7ND9_africa_mut.pdb ) B versus L
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7ND9 | 3482 | 11 | 0 | 1 | 0 | 0 | 1 | 13 |
B7ND9_africa_mut | 3477 | 11 | 0 | 1 | 0 | 0 | 1 | 13 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
B-L | B-L | F486 | Y92 | F486 | Y92 | Hydrophobic | Hydrophobic | 0.41 | View |
B-L | B-L | F486 | Y92 | F486 | Y92 | Aromatic Stacking | Aromatic Stacking | 0.47 | View |
B-L | B-L | F486 | W97 | F486 | W97 | Hydrophobic | Hydrophobic | 0.35 | View |
B-L | B-L | F486 | Y92 | F486 | Y92 | Hydrophobic | Hydrophobic | 0.35 | View |
B-L | B-L | F486 | Y92 | F486 | Y92 | Hydrophobic | Hydrophobic | 0.53 | View |
B-L | B-L | T478 | Y33 | T478 | Y33 | Hydrogen Bonds | Hydrogen Bonds | 0.76 | View |
B-L | B-L | F486 | Y33 | F486 | Y33 | Hydrophobic | Hydrophobic | 0.84 | View |
B-L | B-L | F486 | W97 | F486 | W97 | Hydrophobic | Hydrophobic | 0.56 | View |
B-L | B-L | F486 | W97 | F486 | W97 | Hydrophobic | Hydrophobic | 0.54 | View |
B-L | B-L | F486 | Y92 | F486 | Y92 | Hydrophobic | Hydrophobic | 0.25 | View |
B-L | B-L | F486 | W97 | F486 | W97 | Hydrophobic | Hydrophobic | 0.48 | View |
B-L | B-L | F486 | W97 | F486 | W97 | Hydrophobic | Hydrophobic | 0.39 | View |
B-L | B-L | F486 | Y92 | F486 | Y92 | Hydrophobic | Hydrophobic | 0.43 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |