Execution time: 51.0 seconds
Match RMSD = 0.46
VTR = 0.0
Average AVD = 0.44 Å
Chains(7ND9.pdb ): B versus H
Chains(7ND9_africa_mut.pdb ) B versus H
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7ND9 | 3482 | 22 | 0 | 10 | 0 | 0 | 1 | 33 |
B7ND9_africa_mut | 3477 | 23 | 0 | 11 | 0 | 0 | 1 | 35 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
B-H | B-H | F486 | F110 | F486 | F110 | Hydrophobic | Hydrophobic | 0.44 | View |
B-H | B-H | F486 | F110 | F486 | F110 | Hydrophobic | Hydrophobic | 0.32 | View |
B-H | B-H | T478 | D108 | T478 | D108 | Hydrogen Bonds | Hydrogen Bonds | 0.47 | View |
B-H | B-H | Y489 | V52 | Y489 | V52 | Hydrophobic | Hydrophobic | 0.34 | View |
B-H | B-H | Y489 | V52 | Y489 | V52 | Hydrophobic | Hydrophobic | 0.36 | View |
B-H | B-H | S477 | D108 | S477 | D108 | Hydrogen Bonds | Hydrogen Bonds | 0.48 | View |
B-H | B-H | Y473 | T104 | Y473 | T104 | Hydrogen Bonds | Hydrogen Bonds | 0.59 | View |
B-H | B-H | F486 | F110 | F486 | F110 | Hydrophobic | Hydrophobic | 0.44 | View |
B-H | B-H | A475 | C106 | A475 | C106 | Hydrogen Bonds | Hydrogen Bonds | 0.41 | View |
B-H | B-H | Y489 | V52 | Y489 | V52 | Hydrophobic | Hydrophobic | 0.34 | View |
B-H | B-H | F486 | P99 | F486 | P99 | Hydrophobic | Hydrophobic | 0.46 | View |
B-H | B-H | Y473 | T104 | Y473 | T104 | Hydrogen Bonds | Hydrogen Bonds | 0.61 | View |
B-H | B-H | S477 | D108 | S477 | D108 | Hydrogen Bonds | Hydrogen Bonds | 0.58 | View |
B-H | B-H | Y489 | W50 | Y489 | W50 | Hydrophobic | Hydrophobic | 0.58 | View |
B-H | B-H | F486 | P99 | F486 | P99 | Hydrophobic | Hydrophobic | 0.4 | View |
B-H | B-H | S477 | D108 | S477 | D108 | Hydrogen Bonds | Hydrogen Bonds | 0.75 | View |
B-H | B-H | Y489 | V52 | Y489 | V52 | Hydrophobic | Hydrophobic | 0.26 | View |
B-H | B-H | Y489 | V52 | Y489 | V52 | Hydrophobic | Hydrophobic | 0.41 | View |
B-H | B-H | K458 | T104 | K458 | T104 | Hydrogen Bonds | Hydrogen Bonds | 0.62 | View |
B-H | B-H | F486 | F110 | F486 | F110 | Hydrophobic | Hydrophobic | 0.43 | View |
B-H | B-H | Y489 | W50 | Y489 | W50 | Hydrophobic | Hydrophobic | 0.48 | View |
B-H | B-H | S477 | D108 | S477 | D108 | Hydrogen Bonds | Hydrogen Bonds | 0.65 | View |
B-H | B-H | F486 | P99 | F486 | P99 | Hydrophobic | Hydrophobic | 0.57 | View |
B-H | B-H | F486 | F110 | F486 | F110 | Aromatic Stacking | Aromatic Stacking | 0.36 | View |
B-H | B-H | F486 | F110 | F486 | F110 | Hydrophobic | Hydrophobic | 0.42 | View |
B-H | B-H | A475 | C106 | A475 | C106 | Hydrophobic | Hydrophobic | 0.32 | View |
B-H | B-H | Y489 | V52 | Y489 | V52 | Hydrophobic | Hydrophobic | 0.24 | View |
B-H | B-H | N487 | Y107 | N487 | Y107 | Hydrogen Bonds | Hydrogen Bonds | 0.35 | View |
B-H | B-H | F486 | F110 | F486 | F110 | Hydrophobic | Hydrophobic | 0.33 | View |
B-H | B-H | Y489 | V52 | Y489 | V52 | Hydrophobic | Hydrophobic | 0.43 | View |
B-H | B-H | Y489 | V52 | Y489 | V52 | Hydrophobic | Hydrophobic | 0.28 | View |
B-H | B-H | F486 | P99 | F486 | P99 | Hydrophobic | Hydrophobic | 0.5 | View |
B-H | B-H | Y489 | V52 | Y489 | V52 | Hydrophobic | Hydrophobic | 0.36 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |