Execution time: 24.0 seconds
Match RMSD = 0.36
VTR = 0.0
Average AVD = 0.32 Å
Chains(7ND7.pdb ): A versus L
Chains(7ND7_africa_mut.pdb ) A versus L
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7ND7 | 3699 | 38 | 0 | 2 | 0 | 0 | 3 | 43 |
B7ND7_africa_mut | 3690 | 40 | 0 | 2 | 0 | 0 | 3 | 45 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
A-L | A-L | F486 | Y34 | F486 | Y34 | Hydrophobic | Hydrophobic | 0.62 | View |
A-L | A-L | F486 | W99 | F486 | W99 | Hydrophobic | Hydrophobic | 0.25 | View |
A-L | A-L | F486 | Y93 | F486 | Y93 | Hydrophobic | Hydrophobic | 0.29 | View |
A-L | A-L | F486 | Y34 | F486 | Y34 | Hydrophobic | Hydrophobic | 0.59 | View |
A-L | A-L | F486 | N97 | F486 | N97 | Hydrogen Bonds | Hydrogen Bonds | 0.22 | View |
A-L | A-L | F486 | Y34 | F486 | Y34 | Hydrophobic | Hydrophobic | 0.6 | View |
A-L | A-L | F486 | Y32 | F486 | Y32 | Aromatic Stacking | Aromatic Stacking | 0.41 | View |
A-L | A-L | F486 | Y93 | F486 | Y93 | Hydrophobic | Hydrophobic | 0.31 | View |
A-L | A-L | F486 | Y93 | F486 | Y93 | Hydrophobic | Hydrophobic | 0.11 | View |
A-L | A-L | F486 | Y93 | F486 | Y93 | Hydrophobic | Hydrophobic | 0.14 | View |
A-L | A-L | F486 | Y34 | F486 | Y34 | Hydrophobic | Hydrophobic | 0.68 | View |
A-L | A-L | E484 | N97 | K484 | N97 | Hydrogen Bonds | Hydrogen Bonds | 0.34 | View |
A-L | A-L | F486 | W99 | F486 | W99 | Hydrophobic | Hydrophobic | 0.35 | View |
A-L | A-L | F486 | W99 | F486 | W99 | Hydrophobic | Hydrophobic | 0.3 | View |
A-L | A-L | F486 | W99 | F486 | W99 | Hydrophobic | Hydrophobic | 0.32 | View |
A-L | A-L | F486 | Y93 | F486 | Y93 | Hydrophobic | Hydrophobic | 0.19 | View |
A-L | A-L | F486 | Y93 | F486 | Y93 | Hydrophobic | Hydrophobic | 0.26 | View |
A-L | A-L | F486 | Y93 | F486 | Y93 | Hydrophobic | Hydrophobic | 0.18 | View |
A-L | A-L | F486 | Y93 | F486 | Y93 | Hydrophobic | Hydrophobic | 0.25 | View |
A-L | A-L | F486 | Y34 | F486 | Y34 | Aromatic Stacking | Aromatic Stacking | 0.57 | View |
A-L | A-L | F486 | Y93 | F486 | Y93 | Hydrophobic | Hydrophobic | 0.17 | View |
A-L | A-L | F486 | Y93 | F486 | Y93 | Hydrophobic | Hydrophobic | 0.21 | View |
A-L | A-L | F486 | Y93 | F486 | Y93 | Hydrophobic | Hydrophobic | 0.22 | View |
A-L | A-L | F486 | Y34 | F486 | Y34 | Hydrophobic | Hydrophobic | 0.59 | View |
A-L | A-L | F486 | Y93 | F486 | Y93 | Hydrophobic | Hydrophobic | 0.3 | View |
A-L | A-L | F486 | Y93 | F486 | Y93 | Hydrophobic | Hydrophobic | 0.18 | View |
A-L | A-L | F486 | Y32 | F486 | Y32 | Hydrophobic | Hydrophobic | 0.55 | View |
A-L | A-L | F486 | Y34 | F486 | Y34 | Hydrophobic | Hydrophobic | 0.51 | View |
A-L | A-L | F486 | Y34 | F486 | Y34 | Hydrophobic | Hydrophobic | 0.5 | View |
A-L | A-L | F486 | Y34 | F486 | Y34 | Hydrophobic | Hydrophobic | 0.54 | View |
A-L | A-L | F486 | Y34 | F486 | Y34 | Hydrophobic | Hydrophobic | 0.55 | View |
A-L | A-L | F486 | W99 | F486 | W99 | Hydrophobic | Hydrophobic | 0.29 | View |
A-L | A-L | F486 | Y93 | F486 | Y93 | Hydrophobic | Hydrophobic | 0.32 | View |
A-L | A-L | F486 | Y93 | F486 | Y93 | Aromatic Stacking | Aromatic Stacking | 0.25 | View |
A-L | A-L | F486 | Y93 | F486 | Y93 | Hydrophobic | Hydrophobic | 0.19 | View |
A-L | A-L | F486 | W99 | F486 | W99 | Hydrophobic | Hydrophobic | 0.24 | View |
A-L | A-L | F486 | Y93 | F486 | Y93 | Hydrophobic | Hydrophobic | 0.21 | View |
A-L | A-L | F486 | Y93 | F486 | Y93 | Hydrophobic | Hydrophobic | 0.15 | View |
A-L | A-L | F486 | Y93 | F486 | Y93 | Hydrophobic | Hydrophobic | 0.15 | View |
A-L | A-L | F486 | Y93 | F486 | Y93 | Hydrophobic | Hydrophobic | 0.21 | View |
A-L | A-L | F486 | Y93 | F486 | Y93 | Hydrophobic | Hydrophobic | 0.16 | View |
A-L | A-L | F486 | Y93 | F486 | Y93 | Hydrophobic | Hydrophobic | 0.14 | View |
A-L | A-L | F486 | Y93 | F486 | Y93 | Hydrophobic | Hydrophobic | 0.3 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |