Execution time: 7.0 seconds
Match RMSD = 0.63
VTR = 0.04
Average AVD = 0.56 Å
Chains(7MMO.pdb ): F versus E
Chains(7MMO_africa_mut.pdb ) F versus E
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7MMO | 1215 | 13 | 0 | 6 | 0 | 0 | 0 | 19 |
B7MMO_africa_mut | 1215 | 19 | 0 | 6 | 0 | 0 | 0 | 25 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
E-F | E-F | T96 | Q498 | T96 | Q498 | Hydrogen Bonds | Hydrogen Bonds | 1.36 | View |
E-F | E-F | Y94 | P499 | Y94 | P499 | Hydrophobic | Hydrophobic | 0.37 | View |
E-F | E-F | T96 | G446 | T96 | G446 | Hydrogen Bonds | Hydrogen Bonds | 1.13 | View |
E-F | E-F | Y94 | V445 | Y94 | V445 | Hydrophobic | Hydrophobic | 0.57 | View |
E-F | E-F | Y35 | N440 | Y35 | N440 | Hydrogen Bonds | Hydrogen Bonds | 0.33 | View |
E-F | E-F | Y94 | P499 | Y94 | P499 | Hydrophobic | Hydrophobic | 0.34 | View |
E-F | E-F | Y94 | P499 | Y94 | P499 | Hydrophobic | Hydrophobic | 0.48 | View |
E-F | E-F | Y94 | V445 | Y94 | V445 | Hydrophobic | Hydrophobic | 0.53 | View |
E-F | E-F | Y94 | P499 | Y94 | P499 | Hydrophobic | Hydrophobic | 0.49 | View |
E-F | E-F | Y35 | N439 | Y35 | N439 | Hydrogen Bonds | Hydrogen Bonds | 0.59 | View |
E-F | E-F | Y94 | P499 | Y94 | P499 | Hydrophobic | Hydrophobic | 0.52 | View |
E-F | E-F | D32 | T500 | D32 | T500 | Hydrogen Bonds | Hydrogen Bonds | 0.84 | View |
E-F | E-F | Y94 | P499 | Y94 | P499 | Hydrophobic | Hydrophobic | 0.57 | View |
E-F | E-F | Y94 | P499 | Y94 | P499 | Hydrophobic | Hydrophobic | 0.33 | View |
E-F | E-F | Y35 | P499 | Y35 | P499 | Hydrophobic | Hydrophobic | 0.26 | View |
E-F | E-F | Y35 | P499 | Y35 | P499 | Hydrophobic | Hydrophobic | 0.27 | View |
E-F | E-F | Y94 | P499 | Y94 | P499 | Hydrophobic | Hydrophobic | 0.52 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7MMO | E-F | N34 | N501 | Hydrogen Bonds | 3.64 | View |
7MMO | E-F | Y94 | T500 | Hydrophobic | 3.88 | View |
7MMO_africa_mut | E-F | D32 | Y501 | Hydrophobic | 3.02 | View |
7MMO_africa_mut | E-F | D32 | Y501 | Hydrophobic | 3.18 | View |
7MMO_africa_mut | E-F | D32 | Y501 | Hydrophobic | 4.34 | View |
7MMO_africa_mut | E-F | D32 | Y501 | Hydrophobic | 2.90 | View |
7MMO_africa_mut | E-F | D32 | Y501 | Hydrophobic | 3.88 | View |
7MMO_africa_mut | E-F | Y33 | T500 | Hydrogen Bonds | 3.76 | View |
7MMO_africa_mut | E-F | N34 | Y501 | Hydrophobic | 4.19 | View |
7MMO_africa_mut | E-F | T96 | T500 | Hydrophobic | 4.32 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |