Execution time: 10.0 seconds
Match RMSD = 0.45
VTR = 0.01
Average AVD = 0.42 Å
Chains(7MMO.pdb ): C versus A
Chains(7MMO_africa_mut.pdb ) C versus A
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7MMO | 1215 | 19 | 4 | 10 | 0 | 2 | 0 | 35 |
B7MMO_africa_mut | 1215 | 22 | 4 | 10 | 0 | 2 | 0 | 38 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
A-C | A-C | Y54 | K444 | Y54 | K444 | Hydrophobic | Hydrophobic | 0.35 | View |
A-C | A-C | R60 | G447 | R60 | G447 | Hydrogen Bonds | Hydrogen Bonds | 0.3 | View |
A-C | A-C | D56 | N450 | D56 | N450 | Hydrogen Bonds | Hydrogen Bonds | 0.9 | View |
A-C | A-C | D58 | K444 | D58 | K444 | Hydrophobic | Hydrophobic | 0.53 | View |
A-C | A-C | Y54 | K444 | Y54 | K444 | Hydrophobic | Hydrophobic | 0.29 | View |
A-C | A-C | Y54 | K444 | Y54 | K444 | Hydrophobic | Hydrophobic | 0.29 | View |
A-C | A-C | R60 | K444 | R60 | K444 | Repulsive | Repulsive | 0.33 | View |
A-C | A-C | L52 | V445 | L52 | V445 | Hydrophobic | Hydrophobic | 0.48 | View |
A-C | A-C | I102 | V445 | I102 | V445 | Hydrophobic | Hydrophobic | 0.39 | View |
A-C | A-C | Y54 | K444 | Y54 | K444 | Hydrophobic | Hydrophobic | 0.27 | View |
A-C | A-C | W49 | V445 | W49 | V445 | Hydrophobic | Hydrophobic | 0.73 | View |
A-C | A-C | I102 | P499 | I102 | P499 | Hydrophobic | Hydrophobic | 0.45 | View |
A-C | A-C | Y54 | K444 | Y54 | K444 | Hydrophobic | Hydrophobic | 0.24 | View |
A-C | A-C | D56 | K444 | D56 | K444 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 0.43 | View |
A-C | A-C | S30 | R346 | S30 | R346 | Hydrogen Bonds | Hydrogen Bonds | 0.65 | View |
A-C | A-C | D56 | K444 | D56 | K444 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 0.85 | View |
A-C | A-C | L52 | V445 | L52 | V445 | Hydrophobic | Hydrophobic | 0.49 | View |
A-C | A-C | S30 | R346 | S30 | R346 | Hydrogen Bonds | Hydrogen Bonds | 0.56 | View |
A-C | A-C | R60 | G447 | R60 | G447 | Hydrogen Bonds | Hydrogen Bonds | 0.24 | View |
A-C | A-C | R60 | V445 | R60 | V445 | Hydrogen Bonds | Hydrogen Bonds | 0.26 | View |
A-C | A-C | I102 | P499 | I102 | P499 | Hydrophobic | Hydrophobic | 0.34 | View |
A-C | A-C | D58 | K444 | D58 | K444 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 0.34 | View |
A-C | A-C | Y54 | K444 | Y54 | K444 | Hydrophobic | Hydrophobic | 0.4 | View |
A-C | A-C | D58 | K444 | D58 | K444 | Attractive | Attractive | 0.39 | View |
A-C | A-C | Y54 | K444 | Y54 | K444 | Hydrophobic | Hydrophobic | 0.42 | View |
A-C | A-C | Y54 | V445 | Y54 | V445 | Hydrogen Bonds | Hydrogen Bonds | 0.3 | View |
A-C | A-C | R60 | K444 | R60 | K444 | Repulsive | Repulsive | 0.32 | View |
A-C | A-C | W49 | V445 | W49 | V445 | Hydrophobic | Hydrophobic | 0.57 | View |
A-C | A-C | Y54 | K444 | Y54 | K444 | Hydrophobic | Hydrophobic | 0.27 | View |
A-C | A-C | I102 | P499 | I102 | P499 | Hydrophobic | Hydrophobic | 0.32 | View |
A-C | A-C | Y54 | K444 | Y54 | K444 | Hydrophobic | Hydrophobic | 0.25 | View |
A-C | A-C | Y54 | K444 | Y54 | K444 | Hydrophobic | Hydrophobic | 0.31 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |