Execution time: 18.0 seconds
Match RMSD = 1.21
VTR = 0.15
Average AVD = 1.11 Å
Chains(7M6I.pdb ): C versus H
Chains(7M6I_africa_mut.pdb ) C versus H
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7M6I | 3428 | 18 | 0 | 11 | 0 | 0 | 1 | 30 |
B7M6I_africa_mut | 3419 | 34 | 0 | 15 | 0 | 0 | 1 | 50 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
C-H | C-H | Y473 | Y97 | Y473 | Y97 | Hydrogen Bonds | Hydrogen Bonds | 1.39 | View |
C-H | C-H | Y351 | M53 | Y351 | M53 | Hydrophobic | Hydrophobic | 0.88 | View |
C-H | C-H | S494 | Y98 | S494 | Y98 | Hydrogen Bonds | Hydrogen Bonds | 0.92 | View |
C-H | C-H | Y473 | R50 | Y473 | R50 | Hydrogen Bonds | Hydrogen Bonds | 0.65 | View |
C-H | C-H | F490 | Y99 | F490 | Y99 | Hydrophobic | Hydrophobic | 1.95 | View |
C-H | C-H | L492 | M53 | L492 | M53 | Hydrophobic | Hydrophobic | 1.08 | View |
C-H | C-H | F490 | Y99 | F490 | Y99 | Hydrophobic | Hydrophobic | 1.78 | View |
C-H | C-H | V483 | R50 | V483 | R50 | Hydrophobic | Hydrophobic | 0.39 | View |
C-H | C-H | G482 | R50 | G482 | R50 | Hydrogen Bonds | Hydrogen Bonds | 0.89 | View |
C-H | C-H | V483 | W47 | V483 | W47 | Hydrophobic | Hydrophobic | 0.33 | View |
C-H | C-H | Y449 | T28 | Y449 | T28 | Hydrogen Bonds | Hydrogen Bonds | 1.58 | View |
C-H | C-H | V483 | W47 | V483 | W47 | Hydrophobic | Hydrophobic | 0.33 | View |
C-H | C-H | G482 | R50 | G482 | R50 | Hydrogen Bonds | Hydrogen Bonds | 0.82 | View |
C-H | C-H | Q493 | Y99 | P491 | Y99 | Hydrophobic | Hydrogen Bonds | 1.64 | View |
C-H | C-H | Y449 | T28 | Y449 | T28 | Hydrophobic | Hydrophobic | 1.02 | View |
C-H | C-H | L452 | M53 | L452 | M53 | Hydrophobic | Hydrophobic | 0.96 | View |
C-H | C-H | F490 | Y97 | F490 | Y97 | Hydrogen Bonds | Hydrogen Bonds | 1.82 | View |
C-H | C-H | Y449 | F29 | Y449 | F29 | Hydrogen Bonds | Hydrogen Bonds | 1.61 | View |
C-H | C-H | Y351 | M53 | Y351 | M53 | Hydrophobic | Hydrophobic | 0.83 | View |
C-H | C-H | L492 | Y98 | L492 | Y98 | Hydrogen Bonds | Hydrogen Bonds | 1.25 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7M6I | C-H | Y449 | T28 | Hydrogen Bonds | 3.88 | View |
7M6I | C-H | F490 | Y99 | Hydrophobic | 4.22 | View |
7M6I | C-H | F490 | Y99 | Aromatic Stacking | 5.08 | View |
7M6I | C-H | F490 | Y99 | Hydrophobic | 4.19 | View |
7M6I | C-H | F490 | Y99 | Hydrophobic | 3.29 | View |
7M6I | C-H | F490 | Y99 | Hydrophobic | 4.26 | View |
7M6I | C-H | F490 | Y99 | Hydrophobic | 4.07 | View |
7M6I | C-H | F490 | Y99 | Hydrophobic | 4.38 | View |
7M6I | C-H | L492 | Y99 | Hydrophobic | 4.24 | View |
7M6I | C-H | Q493 | D100 | Hydrogen Bonds | 3.33 | View |
7M6I_africa_mut | C-H | Y449 | T28 | Hydrophobic | 4.29 | View |
7M6I_africa_mut | C-H | L452 | Y98 | Hydrophobic | 4.00 | View |
7M6I_africa_mut | C-H | I468 | F54 | Hydrophobic | 4.47 | View |
7M6I_africa_mut | C-H | I472 | I56 | Hydrophobic | 4.43 | View |
7M6I_africa_mut | C-H | Y489 | Y99 | Hydrophobic | 4.14 | View |
7M6I_africa_mut | C-H | Y489 | Y99 | Hydrophobic | 3.73 | View |
7M6I_africa_mut | C-H | Y489 | Y99 | Aromatic Stacking | 5.04 | View |
7M6I_africa_mut | C-H | Y489 | Y99 | Hydrophobic | 3.78 | View |
7M6I_africa_mut | C-H | Y489 | Y99 | Hydrophobic | 3.87 | View |
7M6I_africa_mut | C-H | Y489 | Y99 | Hydrophobic | 3.58 | View |
7M6I_africa_mut | C-H | Y489 | Y99 | Hydrophobic | 4.04 | View |
7M6I_africa_mut | C-H | Y489 | Y99 | Hydrophobic | 4.29 | View |
7M6I_africa_mut | C-H | Y489 | Y99 | Hydrophobic | 4.47 | View |
7M6I_africa_mut | C-H | Y489 | Y99 | Hydrophobic | 3.99 | View |
7M6I_africa_mut | C-H | F490 | Y97 | Hydrophobic | 4.25 | View |
7M6I_africa_mut | C-H | F490 | Y97 | Hydrophobic | 3.33 | View |
7M6I_africa_mut | C-H | F490 | Y97 | Hydrophobic | 4.02 | View |
7M6I_africa_mut | C-H | F490 | Y97 | Hydrophobic | 4.22 | View |
7M6I_africa_mut | C-H | F490 | Y97 | Hydrophobic | 4.02 | View |
7M6I_africa_mut | C-H | F490 | Y99 | Hydrogen Bonds | 2.90 | View |
7M6I_africa_mut | C-H | L492 | Y99 | Hydrogen Bonds | 3.31 | View |
7M6I_africa_mut | C-H | Q493 | Y98 | Hydrophobic | 4.46 | View |
7M6I_africa_mut | C-H | Q493 | Y98 | Hydrophobic | 4.14 | View |
7M6I_africa_mut | C-H | Q493 | Y98 | Hydrogen Bonds | 3.12 | View |
7M6I_africa_mut | C-H | Q493 | Y99 | Hydrogen Bonds | 3.20 | View |
7M6I_africa_mut | C-H | Q493 | Y99 | Hydrophobic | 3.91 | View |
7M6I_africa_mut | C-H | Q493 | Y99 | Hydrophobic | 4.08 | View |
7M6I_africa_mut | C-H | Q493 | Y99 | Hydrophobic | 4.48 | View |
7M6I_africa_mut | C-H | Q493 | Y99 | Hydrophobic | 2.94 | View |
7M6I_africa_mut | C-H | S494 | Y98 | Hydrogen Bonds | 3.49 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |