Execution time: 19.0 seconds
Match RMSD = 1.08
VTR = 0.11
Average AVD = 1.01 Å
Chains(7M6H.pdb ): B versus D
Chains(7M6H_africa_mut.pdb ) B versus D
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7M6H | 3440 | 26 | 0 | 5 | 0 | 0 | 0 | 31 |
B7M6H_africa_mut | 3431 | 38 | 2 | 9 | 0 | 1 | 0 | 50 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
B-D | B-D | E484 | W50 | K484 | W50 | Hydrophobic | Hydrophobic | 0.8 | View |
B-D | B-D | Q493 | I53 | Q493 | I53 | Hydrophobic | Hydrophobic | 1.17 | View |
B-D | B-D | Y449 | T30 | Y449 | T30 | Hydrogen Bonds | Hydrogen Bonds | 0.8 | View |
B-D | B-D | Y449 | F29 | Y449 | F29 | Hydrophobic | Hydrophobic | 0.6 | View |
B-D | B-D | E484 | W50 | K484 | W50 | Hydrophobic | Hydrophobic | 1.71 | View |
B-D | B-D | Y449 | T76 | Y449 | T76 | Hydrophobic | Hydrophobic | 1.14 | View |
B-D | B-D | Y449 | T76 | Y449 | T76 | Hydrophobic | Hydrophobic | 1.01 | View |
B-D | B-D | E484 | W50 | K484 | W50 | Hydrophobic | Hydrophobic | 0.97 | View |
B-D | B-D | Q493 | T30 | Q493 | T30 | Hydrogen Bonds | Hydrogen Bonds | 0.5 | View |
B-D | B-D | Y449 | T76 | Y449 | T76 | Hydrophobic | Hydrophobic | 0.89 | View |
B-D | B-D | E484 | W50 | K484 | W50 | Hydrophobic | Hydrophobic | 1.26 | View |
B-D | B-D | E484 | W50 | K484 | W50 | Hydrophobic | Hydrophobic | 1.83 | View |
B-D | B-D | L452 | I53 | L452 | I53 | Hydrophobic | Hydrophobic | 1.27 | View |
B-D | B-D | Y449 | T76 | Y449 | T76 | Hydrophobic | Hydrophobic | 0.96 | View |
B-D | B-D | E484 | W50 | K484 | W50 | Hydrophobic | Hydrophobic | 1.81 | View |
B-D | B-D | Y489 | R97 | Y489 | R97 | Hydrogen Bonds | Hydrogen Bonds | 1.09 | View |
B-D | B-D | E484 | W50 | K484 | W50 | Hydrophobic | Hydrophobic | 0.52 | View |
B-D | B-D | S494 | T30 | S494 | T30 | Hydrogen Bonds | Hydrogen Bonds | 0.37 | View |
B-D | B-D | Y449 | T30 | Y449 | T30 | Hydrophobic | Hydrophobic | 0.6 | View |
B-D | B-D | E484 | W50 | K484 | W50 | Hydrophobic | Hydrophobic | 0.61 | View |
B-D | B-D | Y449 | T76 | Y449 | T76 | Hydrophobic | Hydrophobic | 1.25 | View |
B-D | B-D | E484 | W50 | K484 | W50 | Hydrophobic | Hydrophobic | 0.63 | View |
B-D | B-D | F490 | I53 | F490 | I53 | Hydrophobic | Hydrophobic | 1.37 | View |
B-D | B-D | Q493 | I53 | Q493 | I53 | Hydrophobic | Hydrophobic | 1.11 | View |
B-D | B-D | E484 | W50 | K484 | W50 | Hydrophobic | Hydrophobic | 0.86 | View |
B-D | B-D | F490 | I53 | F490 | I53 | Hydrophobic | Hydrophobic | 1.04 | View |
B-D | B-D | F490 | I53 | F490 | I53 | Hydrophobic | Hydrophobic | 0.85 | View |
B-D | B-D | Y489 | R97 | Y489 | R97 | Hydrogen Bonds | Hydrogen Bonds | 1.24 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7M6H | B-D | E484 | W50 | Hydrophobic | 3.90 | View |
7M6H | B-D | Y489 | C99 | Hydrophobic | 4.15 | View |
7M6H | B-D | Y489 | C99 | Hydrophobic | 3.70 | View |
7M6H_africa_mut | B-D | Y449 | T76 | Hydrophobic | 3.85 | View |
7M6H_africa_mut | B-D | K484 | D33 | Attractive, Hydrogen Bonds | 2.65 | View |
7M6H_africa_mut | B-D | K484 | D33 | Attractive, Hydrogen Bonds | 2.93 | View |
7M6H_africa_mut | B-D | K484 | W50 | Hydrophobic | 4.26 | View |
7M6H_africa_mut | B-D | K484 | W50 | Hydrophobic | 4.12 | View |
7M6H_africa_mut | B-D | K484 | W50 | Hydrophobic | 4.06 | View |
7M6H_africa_mut | B-D | K484 | W50 | Hydrophobic | 3.94 | View |
7M6H_africa_mut | B-D | K484 | W50 | Hydrophobic | 3.43 | View |
7M6H_africa_mut | B-D | K484 | W50 | Hydrophobic | 4.13 | View |
7M6H_africa_mut | B-D | K484 | W50 | Hydrophobic | 3.23 | View |
7M6H_africa_mut | B-D | K484 | W50 | Hydrophobic | 3.61 | View |
7M6H_africa_mut | B-D | K484 | R97 | Repulsive | 5.94 | View |
7M6H_africa_mut | B-D | Y489 | R97 | Hydrogen Bonds | 3.01 | View |
7M6H_africa_mut | B-D | F490 | N52 | Hydrophobic | 4.28 | View |
7M6H_africa_mut | B-D | F490 | I53 | Hydrophobic | 4.32 | View |
7M6H_africa_mut | B-D | F490 | I53 | Hydrophobic | 4.32 | View |
7M6H_africa_mut | B-D | F490 | I53 | Hydrophobic | 3.84 | View |
7M6H_africa_mut | B-D | F490 | I53 | Hydrophobic | 3.94 | View |
7M6H_africa_mut | B-D | Q493 | T30 | Hydrophobic | 4.30 | View |
7M6H_africa_mut | B-D | G496 | T28 | Hydrogen Bonds | 3.77 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |