Execution time: 20.0 seconds
Match RMSD = 0.94
VTR = 0.04
Average AVD = 0.84 Å
Chains(7M6H.pdb ): A versus E
Chains(7M6H_africa_mut.pdb ) A versus E
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7M6H | 3440 | 33 | 0 | 15 | 0 | 2 | 1 | 51 |
B7M6H_africa_mut | 3431 | 40 | 2 | 20 | 0 | 0 | 1 | 63 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
A-E | A-E | Y449 | F29 | Y449 | F29 | Hydrophobic | Hydrophobic | 0.78 | View |
A-E | A-E | E484 | W50 | K484 | W50 | Hydrogen Bonds | Hydrogen Bonds | 0.42 | View |
A-E | A-E | Y449 | T76 | Y449 | T76 | Hydrophobic | Hydrophobic | 0.71 | View |
A-E | A-E | E484 | W50 | K484 | W50 | Hydrophobic | Hydrophobic | 0.16 | View |
A-E | A-E | E484 | W50 | K484 | W50 | Hydrophobic | Hydrophobic | 0.22 | View |
A-E | A-E | Y449 | F29 | Y449 | F29 | Hydrophobic | Hydrophobic | 0.83 | View |
A-E | A-E | F490 | I53 | F490 | I53 | Hydrophobic | Hydrophobic | 1.08 | View |
A-E | A-E | Y449 | F29 | Y449 | F29 | Hydrophobic | Hydrophobic | 0.7 | View |
A-E | A-E | Y489 | D33 | Y489 | D33 | Hydrogen Bonds | Hydrogen Bonds | 1.28 | View |
A-E | A-E | E484 | D33 | K484 | D33 | Repulsive | Attractive Hydrogen Bonds | 1.58 | View |
A-E | A-E | E484 | W50 | K484 | W50 | Hydrophobic | Hydrophobic | 1.32 | View |
A-E | A-E | E484 | W50 | K484 | W50 | Hydrophobic | Hydrophobic | 1.33 | View |
A-E | A-E | E484 | D33 | K484 | D33 | Repulsive | Attractive Hydrogen Bonds | 1.45 | View |
A-E | A-E | Y449 | F29 | Y449 | F29 | Hydrophobic | Hydrophobic | 0.83 | View |
A-E | A-E | Y449 | T76 | Y449 | T76 | Hydrophobic | Hydrophobic | 0.43 | View |
A-E | A-E | Y449 | F29 | Y449 | F29 | Hydrophobic | Hydrophobic | 0.81 | View |
A-E | A-E | Q493 | T30 | Q493 | T30 | Hydrogen Bonds | Hydrogen Bonds | 1.56 | View |
A-E | A-E | Y449 | F29 | Y449 | F29 | Hydrophobic | Hydrophobic | 0.75 | View |
A-E | A-E | Q493 | C99 | Q493 | C99 | Hydrogen Bonds | Hydrogen Bonds | 1.39 | View |
A-E | A-E | E484 | W50 | K484 | W50 | Hydrophobic | Hydrophobic | 1.26 | View |
A-E | A-E | Y489 | R97 | Y489 | R97 | Hydrophobic | Hydrophobic | 1.01 | View |
A-E | A-E | Y449 | F29 | Y449 | F29 | Hydrophobic | Hydrophobic | 0.87 | View |
A-E | A-E | Y449 | F29 | Y449 | F29 | Hydrophobic | Hydrophobic | 0.66 | View |
A-E | A-E | Y449 | G26 | Y449 | G26 | Hydrogen Bonds | Hydrogen Bonds | 0.58 | View |
A-E | A-E | Q498 | G26 | Q498 | G26 | Hydrogen Bonds | Hydrogen Bonds | 0.59 | View |
A-E | A-E | Y505 | T28 | Y505 | T28 | Hydrogen Bonds | Hydrogen Bonds | 0.93 | View |
A-E | A-E | Q493 | I53 | Q493 | I53 | Hydrophobic | Hydrophobic | 1.75 | View |
A-E | A-E | E484 | W50 | K484 | W50 | Hydrophobic | Hydrophobic | 0.27 | View |
A-E | A-E | E484 | W50 | K484 | W50 | Hydrophobic | Hydrophobic | 0.25 | View |
A-E | A-E | Y449 | Y27 | Y449 | Y27 | Hydrogen Bonds | Hydrogen Bonds | 0.55 | View |
A-E | A-E | Y449 | F29 | Y449 | F29 | Hydrophobic | Hydrophobic | 0.59 | View |
A-E | A-E | E484 | W50 | K484 | W50 | Hydrophobic | Hydrophobic | 1.36 | View |
A-E | A-E | L492 | S54 | L492 | S54 | Hydrogen Bonds | Hydrogen Bonds | 0.82 | View |
A-E | A-E | Y449 | F29 | Y449 | F29 | Aromatic Stacking | Aromatic Stacking | 0.5 | View |
A-E | A-E | E484 | N52 | K484 | N52 | Hydrophobic | Hydrophobic | 1.07 | View |
A-E | A-E | Y449 | F29 | Y449 | F29 | Hydrophobic | Hydrophobic | 0.77 | View |
A-E | A-E | E484 | W50 | K484 | W50 | Hydrophobic | Hydrophobic | 1.26 | View |
A-E | A-E | F490 | I53 | F490 | I53 | Hydrophobic | Hydrophobic | 1.86 | View |
A-E | A-E | Y449 | F29 | Y449 | F29 | Hydrophobic | Hydrophobic | 0.55 | View |
A-E | A-E | K444 | S74 | K444 | S74 | Hydrogen Bonds | Hydrogen Bonds | 0.76 | View |
A-E | A-E | Y449 | Y27 | Y449 | Y27 | Hydrogen Bonds | Hydrogen Bonds | 0.53 | View |
A-E | A-E | G446 | G26 | G446 | G26 | Hydrogen Bonds | Hydrogen Bonds | 0.47 | View |
A-E | A-E | E484 | N56 | K484 | N56 | Hydrophobic | Hydrophobic | 1.03 | View |
A-E | A-E | Y449 | T76 | Y449 | T76 | Hydrophobic | Hydrophobic | 0.65 | View |
A-E | A-E | S494 | T30 | S494 | T30 | Hydrogen Bonds | Hydrogen Bonds | 0.64 | View |
A-E | A-E | E484 | W50 | K484 | W50 | Hydrophobic | Hydrophobic | 0.17 | View |
A-E | A-E | E484 | W50 | K484 | W50 | Hydrophobic | Hydrophobic | 0.24 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7M6H | A-E | K417 | S100 | Hydrogen Bonds | 3.30 | View |
7M6H | A-E | E484 | N52 | Hydrogen Bonds | 2.63 | View |
7M6H | A-E | Y489 | I53 | Hydrophobic | 4.33 | View |
7M6H | A-E | Y489 | C99 | Hydrophobic | 4.44 | View |
7M6H_africa_mut | A-E | Y449 | F29 | Hydrophobic | 3.82 | View |
7M6H_africa_mut | A-E | Y449 | F29 | Hydrophobic | 3.88 | View |
7M6H_africa_mut | A-E | L455 | I53 | Hydrophobic | 4.49 | View |
7M6H_africa_mut | A-E | K484 | N52 | Hydrophobic | 3.97 | View |
7M6H_africa_mut | A-E | K484 | N52 | Hydrogen Bonds | 2.70 | View |
7M6H_africa_mut | A-E | Y489 | R97 | Hydrophobic | 4.03 | View |
7M6H_africa_mut | A-E | Y489 | R97 | Hydrophobic | 4.17 | View |
7M6H_africa_mut | A-E | Y489 | R97 | Hydrophobic | 2.97 | View |
7M6H_africa_mut | A-E | Y489 | R97 | Hydrogen Bonds | 3.14 | View |
7M6H_africa_mut | A-E | Y489 | C99 | Hydrophobic | 4.29 | View |
7M6H_africa_mut | A-E | Q493 | T30 | Hydrophobic | 4.25 | View |
7M6H_africa_mut | A-E | Q493 | T30 | Hydrogen Bonds | 3.88 | View |
7M6H_africa_mut | A-E | Q493 | S31 | Hydrogen Bonds | 3.85 | View |
7M6H_africa_mut | A-E | Q498 | G26 | Hydrogen Bonds | 3.76 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |