VTR
1 main matches found
(8 matches in total )Execution time: 18.0 seconds
Match RMSD = 0.64
VTR = 0.03
Average AVD = 0.63 Å
Parameters
Chains(7M6G.pdb ): B versus S
Chains(7M6G_africa_mut.pdb ) B versus S
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
| Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
|---|---|---|---|---|---|---|---|---|
| A7M6G | 3368 | 7 | 0 | 1 | 0 | 0 | 0 | 8 |
| B7M6G_africa_mut | 3361 | 9 | 0 | 2 | 0 | 0 | 0 | 11 |
Matches
(Conservatives hydrophobic matches are hidden by default)
| Chains | Residues | Contact types | |||||||
|---|---|---|---|---|---|---|---|---|---|
| A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
| B-S | B-S | P499 | F32 | P499 | F32 | Hydrophobic | Hydrophobic | 0.68 | View |
| B-S | B-S | V445 | Y91 | V445 | Y91 | Hydrophobic | Hydrophobic | 0.73 | View |
| B-S | B-S | V445 | Y91 | V445 | Y91 | Hydrophobic | Hydrophobic | 0.73 | View |
| B-S | B-S | N440 | T31 | N440 | T31 | Hydrogen Bonds | Hydrogen Bonds | 0.41 | View |
| B-S | B-S | V445 | Y91 | V445 | Y91 | Hydrophobic | Hydrophobic | 0.56 | View |
| B-S | B-S | V445 | Y91 | V445 | Y91 | Hydrophobic | Hydrophobic | 0.62 | View |
| B-S | B-S | V445 | Y91 | V445 | Y91 | Hydrophobic | Hydrophobic | 0.66 | View |
| B-S | B-S | V445 | Y91 | V445 | Y91 | Hydrophobic | Hydrophobic | 0.67 | View |