Execution time: 21.0 seconds
Match RMSD = 0.94
VTR = 0.06
Average AVD = 0.84 Å
Chains(7M6E.pdb ): A versus H
Chains(7M6E_africa_mut.pdb ) A versus H
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7M6E | 3747 | 21 | 9 | 14 | 0 | 2 | 1 | 47 |
B7M6E_africa_mut | 3741 | 18 | 12 | 16 | 0 | 3 | 0 | 49 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
A-H | A-H | L441 | W97 | L441 | W97 | Hydrophobic | Hydrophobic | 0.73 | View |
A-H | A-H | N448 | R58 | N448 | R58 | Hydrogen Bonds | Hydrogen Bonds | 0.49 | View |
A-H | A-H | L441 | Y99 | L441 | Y99 | Hydrophobic | Hydrophobic | 0.96 | View |
A-H | A-H | R346 | D54 | R346 | D54 | Attractive | Attractive | 0.68 | View |
A-H | A-H | K444 | D56 | K444 | D56 | Attractive | Attractive | 0.66 | View |
A-H | A-H | R346 | D56 | R346 | D56 | Attractive | Attractive | 0.63 | View |
A-H | A-H | L441 | W97 | L441 | W97 | Hydrophobic | Hydrophobic | 0.87 | View |
A-H | A-H | L441 | W97 | L441 | W97 | Hydrophobic | Hydrophobic | 0.54 | View |
A-H | A-H | N440 | Y99 | N440 | Y99 | Hydrogen Bonds | Hydrogen Bonds | 1.62 | View |
A-H | A-H | L441 | W97 | L441 | W97 | Hydrophobic | Hydrophobic | 0.77 | View |
A-H | A-H | R346 | Y52 | R346 | Y52 | Hydrophobic | Hydrophobic | 0.58 | View |
A-H | A-H | L441 | R58 | L441 | R58 | Hydrogen Bonds | Hydrogen Bonds | 0.67 | View |
A-H | A-H | T345 | Y52 | T345 | Y52 | Hydrogen Bonds | Hydrogen Bonds | 0.5 | View |
A-H | A-H | N343 | Y99 | N343 | Y99 | Hydrogen Bonds | Hydrogen Bonds | 1.92 | View |
A-H | A-H | T345 | S31 | T345 | S31 | Hydrogen Bonds | Hydrogen Bonds | 0.72 | View |
A-H | A-H | R346 | D56 | R346 | D56 | Attractive | Attractive | 0.48 | View |
A-H | A-H | W436 | Y99 | W436 | Y99 | Aromatic Stacking | 1.34 | View | |
A-H | A-H | R346 | D56 | R346 | D56 | Attractive | Attractive | 0.61 | View |
A-H | A-H | R346 | D54 | R346 | D54 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 0.78 | View |
A-H | A-H | L441 | Y99 | L441 | Y99 | Hydrophobic | Hydrophobic | 1.48 | View |
A-H | A-H | K444 | T57 | K444 | T57 | Hydrogen Bonds | Hydrogen Bonds | 0.39 | View |
A-H | A-H | K444 | T57 | K444 | T57 | Hydrogen Bonds | Hydrogen Bonds | 0.42 | View |
A-H | A-H | L441 | W97 | L441 | W97 | Hydrophobic | Hydrophobic | 1.91 | View |
A-H | A-H | R346 | D54 | R346 | D54 | Attractive | Attractive | 0.66 | View |
A-H | A-H | R346 | Y52 | R346 | Y52 | Hydrophobic | Hydrophobic | 0.6 | View |
A-H | A-H | L441 | W97 | L441 | W97 | Hydrophobic | Hydrophobic | 1.32 | View |
A-H | A-H | L441 | W97 | L441 | W97 | Hydrophobic | Hydrophobic | 0.54 | View |
A-H | A-H | L441 | W97 | L441 | W97 | Hydrophobic | Hydrophobic | 0.63 | View |
A-H | A-H | L441 | W97 | L441 | W97 | Hydrophobic | Hydrophobic | 1.28 | View |
A-H | A-H | R346 | R58 | R346 | R58 | Repulsive | Repulsive | 0.46 | View |
A-H | A-H | R346 | D54 | R346 | D54 | Attractive | Attractive | 0.65 | View |
A-H | A-H | N448 | R58 | N448 | R58 | Hydrogen Bonds | Hydrogen Bonds | 0.54 | View |
A-H | A-H | D442 | R58 | D442 | R58 | Attractive | Attractive | 0.49 | View |
A-H | A-H | K444 | R58 | K444 | R58 | Hydrophobic | Hydrophobic | 0.31 | View |
A-H | A-H | N448 | D56 | N448 | D56 | Hydrogen Bonds | Hydrogen Bonds | 0.96 | View |
A-H | A-H | K444 | R58 | K444 | R58 | Repulsive | Repulsive | 0.62 | View |
A-H | A-H | L441 | Y99 | L441 | Y99 | Hydrophobic | Hydrophobic | 1.48 | View |
A-H | A-H | W436 | Y99 | W436 | Y99 | Hydrophobic | Hydrophobic | 1.62 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7M6E | A-H | N343 | Y99 | Hydrogen Bonds | 3.51 | View |
7M6E | A-H | N343 | N100 | Hydrogen Bonds | 3.26 | View |
7M6E | A-H | W436 | Y99 | Hydrophobic | 4.07 | View |
7M6E | A-H | W436 | Y99 | Hydrophobic | 4.22 | View |
7M6E | A-H | L441 | W97 | Hydrophobic | 3.47 | View |
7M6E | A-H | L441 | Y99 | Hydrogen Bonds | 3.73 | View |
7M6E | A-H | L441 | Y99 | Hydrophobic | 3.89 | View |
7M6E | A-H | L441 | Y99 | Hydrophobic | 4.47 | View |
7M6E_africa_mut | A-H | N343 | N100 | Hydrogen Bonds | 3.21 | View |
7M6E_africa_mut | A-H | T345 | Y52 | Hydrophobic | 4.38 | View |
7M6E_africa_mut | A-H | R346 | D54 | Attractive | 5.58 | View |
7M6E_africa_mut | A-H | R346 | D54 | Attractive | 5.52 | View |
7M6E_africa_mut | A-H | R346 | D54 | Attractive | 5.01 | View |
7M6E_africa_mut | A-H | W436 | Y99 | Hydrogen Bonds | 3.72 | View |
7M6E_africa_mut | A-H | D442 | R58 | Hydrogen Bonds | 2.69 | View |
7M6E_africa_mut | A-H | K444 | R58 | Hydrophobic | 4.37 | View |
7M6E_africa_mut | A-H | K444 | R58 | Repulsive | 5.76 | View |
7M6E_africa_mut | A-H | N448 | D56 | Hydrogen Bonds | 3.85 | View |
7M6E_africa_mut | A-H | N450 | D56 | Hydrogen Bonds | 3.67 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |