Execution time: 8.0 seconds
Match RMSD = 0.62
VTR = 0.02
Average AVD = 0.52 Å
Chains(7M6D.pdb ): C versus H
Chains(7M6D_africa_mut.pdb ) C versus H
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7M6D | 1050 | 32 | 3 | 24 | 0 | 0 | 0 | 59 |
B7M6D_africa_mut | 1050 | 41 | 1 | 23 | 0 | 0 | 1 | 66 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
C-H | C-H | Q493 | V99 | Q493 | V98 | Hydrophobic | Hydrophobic | 1.67 | View |
C-H | C-H | T415 | T56 | T415 | T56 | Hydrophobic | Hydrophobic | 0.34 | View |
C-H | C-H | F456 | Y33 | F456 | Y33 | Hydrophobic | Hydrophobic | 0.32 | View |
C-H | C-H | F456 | Y33 | F456 | Y33 | Hydrophobic | Hydrophobic | 0.27 | View |
C-H | C-H | L455 | Y33 | L455 | Y33 | Hydrophobic | Hydrophobic | 0.28 | View |
C-H | C-H | F456 | Y33 | F456 | Y33 | Hydrophobic | Hydrophobic | 0.33 | View |
C-H | C-H | Y489 | R94 | Y489 | R94 | Hydrogen Bonds | Hydrogen Bonds | 0.27 | View |
C-H | C-H | F456 | V99 | F456 | V99 | Hydrophobic | Hydrophobic | 0.83 | View |
C-H | C-H | A475 | T28 | A475 | T28 | Hydrogen Bonds | Hydrogen Bonds | 0.18 | View |
C-H | C-H | Y489 | L96 | Y489 | L96 | Hydrophobic | Hydrophobic | 0.29 | View |
C-H | C-H | L455 | E97 | L455 | E97 | Hydrophobic | Hydrophobic | 0.32 | View |
C-H | C-H | Q493 | V98 | Q493 | V98 | Hydrophobic | Hydrophobic | 1.02 | View |
C-H | C-H | Y421 | G54 | Y421 | G54 | Hydrogen Bonds | Hydrogen Bonds | 0.28 | View |
C-H | C-H | A475 | T28 | A475 | T28 | Hydrogen Bonds | Hydrogen Bonds | 0.27 | View |
C-H | C-H | F486 | V2 | F486 | V2 | Hydrophobic | Hydrophobic | 0.58 | View |
C-H | C-H | N487 | R94 | N487 | R94 | Hydrogen Bonds | Hydrogen Bonds | 0.32 | View |
C-H | C-H | L455 | V98 | L455 | V98 | Hydrophobic | Hydrophobic | 1.15 | View |
C-H | C-H | Y489 | V99 | Y489 | V99 | Hydrophobic | Hydrophobic | 0.96 | View |
C-H | C-H | Y453 | E97 | Y453 | E97 | Hydrogen Bonds | Hydrogen Bonds | 0.62 | View |
C-H | C-H | N460 | G54 | N460 | G54 | Hydrogen Bonds | Hydrogen Bonds | 0.41 | View |
C-H | C-H | Y421 | S53 | Y421 | S53 | Hydrogen Bonds | Hydrogen Bonds | 0.25 | View |
C-H | C-H | G416 | Y58 | G416 | Y58 | Hydrogen Bonds | Hydrogen Bonds | 0.34 | View |
C-H | C-H | F486 | V2 | F486 | V2 | Hydrophobic | Hydrophobic | 0.36 | View |
C-H | C-H | G476 | T28 | G476 | T28 | Hydrogen Bonds | Hydrogen Bonds | 0.45 | View |
C-H | C-H | Y489 | L96 | Y489 | L96 | Hydrophobic | Hydrophobic | 0.3 | View |
C-H | C-H | N460 | G54 | N460 | G54 | Hydrogen Bonds | Hydrogen Bonds | 0.32 | View |
C-H | C-H | F456 | V99 | F456 | V99 | Hydrophobic | Hydrophobic | 0.94 | View |
C-H | C-H | F486 | V2 | F486 | V2 | Hydrophobic | Hydrophobic | 0.73 | View |
C-H | C-H | Y489 | L96 | Y489 | L96 | Hydrophobic | Hydrophobic | 0.16 | View |
C-H | C-H | F456 | L96 | F456 | L96 | Hydrophobic | Hydrophobic | 0.47 | View |
C-H | C-H | Y489 | V99 | Y489 | V99 | Hydrophobic | Hydrophobic | 1.08 | View |
C-H | C-H | R403 | E97 | R403 | E97 | Attractive | Attractive | 0.64 | View |
C-H | C-H | Y473 | R31 | Y473 | R31 | Hydrogen Bonds | Hydrogen Bonds | 0.48 | View |
C-H | C-H | Y489 | L96 | Y489 | L96 | Hydrophobic | Hydrophobic | 0.17 | View |
C-H | C-H | N487 | G26 | N487 | G26 | Hydrogen Bonds | Hydrogen Bonds | 0.38 | View |
C-H | C-H | L455 | V99 | L455 | V99 | Hydrophobic | Hydrophobic | 0.88 | View |
C-H | C-H | N487 | R94 | N487 | R94 | Hydrogen Bonds | Hydrogen Bonds | 0.32 | View |
C-H | C-H | F486 | V2 | F486 | V2 | Hydrophobic | Hydrophobic | 0.66 | View |
C-H | C-H | T415 | Y58 | T415 | Y58 | Hydrogen Bonds | Hydrogen Bonds | 0.25 | View |
C-H | C-H | K417 | Y33 | N417 | Y33 | Hydrophobic | Hydrophobic | 0.98 | View |
C-H | C-H | Y473 | R31 | Y473 | R31 | Hydrophobic | Hydrophobic | 0.23 | View |
C-H | C-H | Q474 | R31 | Q474 | R31 | Hydrogen Bonds | Hydrogen Bonds | 0.27 | View |
C-H | C-H | L455 | E97 | L455 | E97 | Hydrophobic | Hydrophobic | 0.29 | View |
C-H | C-H | Y489 | V99 | Y489 | V99 | Hydrophobic | Hydrophobic | 1.1 | View |
C-H | C-H | R457 | S53 | R457 | S53 | Hydrogen Bonds | Hydrogen Bonds | 0.29 | View |
C-H | C-H | Y489 | L96 | Y489 | L96 | Hydrophobic | Hydrophobic | 0.35 | View |
C-H | C-H | L455 | Y33 | L455 | Y33 | Hydrogen Bonds | Hydrogen Bonds | 0.48 | View |
C-H | C-H | Y421 | S53 | Y421 | S53 | Hydrogen Bonds | Hydrogen Bonds | 0.24 | View |
C-H | C-H | T415 | Y58 | T415 | Y58 | Hydrogen Bonds | Hydrogen Bonds | 0.44 | View |
C-H | C-H | Q493 | V98 | Q493 | V98 | Hydrophobic | Hydrophobic | 0.95 | View |
C-H | C-H | A475 | N32 | A475 | N32 | Hydrogen Bonds | Hydrogen Bonds | 0.21 | View |
C-H | C-H | K417 | Y52 | N417 | Y52 | Hydrophobic | Hydrophobic | 1.2 | View |
C-H | C-H | D420 | T56 | D420 | T56 | Hydrogen Bonds | Hydrogen Bonds | 0.39 | View |
C-H | C-H | F456 | Y33 | F456 | Y33 | Hydrophobic | Hydrophobic | 0.28 | View |
C-H | C-H | F486 | V2 | F486 | V2 | Hydrophobic | Hydrophobic | 0.88 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7M6D | C-H | K417 | E97 | Attractive, Hydrogen Bonds | 2.78 | View |
7M6D | C-H | K417 | E97 | Attractive, Hydrogen Bonds | 2.26 | View |
7M6D_africa_mut | C-H | N417 | Y33 | Hydrogen Bonds | 2.61 | View |
7M6D_africa_mut | C-H | Y421 | Y52 | Hydrophobic | 3.96 | View |
7M6D_africa_mut | C-H | F456 | Y33 | Aromatic Stacking | 5.92 | View |
7M6D_africa_mut | C-H | Y473 | R31 | Hydrophobic | 4.46 | View |
7M6D_africa_mut | C-H | F486 | V102 | Hydrophobic | 4.46 | View |
7M6D_africa_mut | C-H | Y489 | V99 | Hydrophobic | 4.45 | View |
7M6D_africa_mut | C-H | Y489 | V99 | Hydrophobic | 4.38 | View |
7M6D_africa_mut | C-H | Y489 | V99 | Hydrophobic | 3.59 | View |
7M6D_africa_mut | C-H | Y489 | V99 | Hydrophobic | 4.19 | View |
7M6D_africa_mut | C-H | Y489 | V99 | Hydrophobic | 3.03 | View |
7M6D_africa_mut | C-H | Y489 | V99 | Hydrophobic | 4.38 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |