Execution time: 10.0 seconds
Match RMSD = 0.51
VTR = 0.01
Average AVD = 0.44 Å
Chains(7M6D.pdb ): C versus A
Chains(7M6D_africa_mut.pdb ) C versus A
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7M6D | 1050 | 23 | 5 | 8 | 0 | 0 | 0 | 36 |
B7M6D_africa_mut | 1050 | 29 | 5 | 9 | 0 | 0 | 0 | 43 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
A-C | A-C | T31 | F377 | T31 | F377 | Hydrophobic | Hydrophobic | 0.34 | View |
A-C | A-C | Y52 | K378 | Y52 | K378 | Hydrophobic | Hydrophobic | 0.4 | View |
A-C | A-C | T31 | Y369 | T31 | Y369 | Hydrophobic | Hydrophobic | 0.21 | View |
A-C | A-C | D54 | K378 | D54 | K378 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 0.48 | View |
A-C | A-C | I98 | Y380 | I98 | Y380 | Hydrophobic | Hydrophobic | 0.72 | View |
A-C | A-C | Y52 | F377 | Y52 | F377 | Hydrogen Bonds | Hydrogen Bonds | 0.19 | View |
A-C | A-C | D54 | K378 | D54 | K378 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 0.63 | View |
A-C | A-C | T31 | F377 | T31 | F377 | Hydrophobic | Hydrophobic | 0.39 | View |
A-C | A-C | E56 | Y380 | E56 | Y380 | Hydrogen Bonds | Hydrogen Bonds | 0.4 | View |
A-C | A-C | G28 | N370 | G28 | N370 | Hydrogen Bonds | Hydrogen Bonds | 0.3 | View |
A-C | A-C | I98 | Y380 | I98 | Y380 | Hydrophobic | Hydrophobic | 0.94 | View |
A-C | A-C | Y52 | K378 | Y52 | K378 | Hydrophobic | Hydrophobic | 0.39 | View |
A-C | A-C | I98 | Y380 | I98 | Y380 | Hydrophobic | Hydrophobic | 0.98 | View |
A-C | A-C | I30 | F377 | I30 | F377 | Hydrophobic | Hydrophobic | 0.53 | View |
A-C | A-C | W33 | K378 | W33 | K378 | Hydrophobic | Hydrophobic | 0.22 | View |
A-C | A-C | E56 | K378 | E56 | K378 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 0.23 | View |
A-C | A-C | I98 | Y380 | I98 | Y380 | Hydrophobic | Hydrophobic | 0.69 | View |
A-C | A-C | I30 | F377 | I30 | F377 | Hydrophobic | Hydrophobic | 0.37 | View |
A-C | A-C | Y52 | F377 | Y52 | F377 | Hydrogen Bonds | Hydrogen Bonds | 0.17 | View |
A-C | A-C | T31 | P384 | T31 | P384 | Hydrophobic | Hydrophobic | 0.51 | View |
A-C | A-C | W33 | K378 | W33 | K378 | Hydrophobic | Hydrophobic | 0.24 | View |
A-C | A-C | I98 | Y380 | I98 | Y380 | Hydrophobic | Hydrophobic | 0.97 | View |
A-C | A-C | D101 | K386 | D101 | K386 | Attractive | Attractive | 0.74 | View |
A-C | A-C | I30 | F374 | I30 | F374 | Hydrophobic | Hydrophobic | 0.18 | View |
A-C | A-C | I30 | F377 | I30 | F377 | Hydrophobic | Hydrophobic | 0.2 | View |
A-C | A-C | T31 | F377 | T31 | F377 | Hydrophobic | Hydrophobic | 0.43 | View |
A-C | A-C | Y52 | K378 | Y52 | K378 | Hydrophobic | Hydrophobic | 0.3 | View |
A-C | A-C | I98 | C379 | I98 | C379 | Hydrogen Bonds | Hydrogen Bonds | 0.36 | View |
A-C | A-C | I30 | F377 | I30 | F377 | Hydrophobic | Hydrophobic | 0.17 | View |
A-C | A-C | T31 | F377 | T31 | F377 | Hydrophobic | Hydrophobic | 0.28 | View |
A-C | A-C | T31 | F377 | T31 | F377 | Hydrophobic | Hydrophobic | 0.32 | View |
A-C | A-C | I98 | Y380 | I98 | Y380 | Hydrophobic | Hydrophobic | 1.08 | View |
A-C | A-C | E56 | K378 | E56 | K378 | Attractive | Attractive | 0.21 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7M6D_africa_mut | A-C | I30 | F377 | Hydrophobic | 4.43 | View |
7M6D_africa_mut | A-C | T31 | F377 | Hydrophobic | 4.38 | View |
7M6D_africa_mut | A-C | W33 | C379 | Hydrogen Bonds | 3.79 | View |
7M6D_africa_mut | A-C | W33 | Y380 | Hydrophobic | 4.21 | View |
7M6D_africa_mut | A-C | W33 | Y380 | Hydrophobic | 4.40 | View |
7M6D_africa_mut | A-C | Y52 | T376 | Hydrophobic | 3.87 | View |
7M6D_africa_mut | A-C | Y52 | K378 | Hydrophobic | 4.36 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |