Execution time: 16.0 seconds
Match RMSD = 0.62
VTR = 0.04
Average AVD = 0.51 Å
Chains(7LY3.pdb ): B versus E
Chains(7LY3_africa_mut.pdb ) B versus E
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7LY3 | 1429 | 15 | 2 | 18 | 0 | 8 | 1 | 44 |
B7LY3_africa_mut | 1423 | 18 | 2 | 11 | 0 | 0 | 1 | 32 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
B-E | B-E | K147 | D50 | K147 | D50 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 0.54 | View |
B-E | B-E | K147 | K29 | K147 | K29 | Hydrogen Bonds | Hydrogen Bonds | 0.12 | View |
B-E | B-E | H146 | A28 | H146 | A28 | Hydrogen Bonds | Hydrogen Bonds | 0.59 | View |
B-E | B-E | E156 | I93 | E156 | I93 | Hydrophobic | Hydrophobic | 0.49 | View |
B-E | B-E | K147 | L27 | K147 | L27 | Hydrogen Bonds | Hydrogen Bonds | 0.23 | View |
B-E | B-E | N148 | A28 | N148 | A28 | Hydrogen Bonds | Hydrogen Bonds | 0.66 | View |
B-E | B-E | P251 | W97 | P251 | W97 | Hydrophobic | Hydrophobic | 0.35 | View |
B-E | B-E | N148 | A28 | N148 | A28 | Hydrogen Bonds | Hydrogen Bonds | 0.46 | View |
B-E | B-E | R158 | I93 | R158 | I93 | Hydrophobic | Hydrophobic | 1.49 | View |
B-E | B-E | H146 | A28 | H146 | A28 | Hydrogen Bonds | Hydrogen Bonds | 0.52 | View |
B-E | B-E | Y144 | H30 | Y144 | H30 | Aromatic Stacking | Aromatic Stacking | 0.31 | View |
B-E | B-E | K147 | Y31 | K147 | Y31 | Hydrophobic | Hydrophobic | 0.2 | View |
B-E | B-E | N148 | G67 | N148 | G67 | Hydrogen Bonds | Hydrogen Bonds | 0.49 | View |
B-E | B-E | L249 | I93 | L249 | I93 | Hydrophobic | Hydrophobic | 0.82 | View |
B-E | B-E | Y144 | K29 | Y144 | K29 | Hydrophobic | Hydrophobic | 0.25 | View |
B-E | B-E | Y144 | K29 | Y144 | K29 | Hydrophobic | Hydrophobic | 0.2 | View |
B-E | B-E | K147 | Y31 | K147 | Y31 | Hydrophobic | Hydrophobic | 0.24 | View |
B-E | B-E | R158 | I93 | R158 | I93 | Hydrophobic | Hydrophobic | 0.54 | View |
B-E | B-E | Y144 | K29 | Y144 | K29 | Hydrophobic | Hydrophobic | 0.25 | View |
B-E | B-E | K147 | D50 | K147 | D50 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 0.52 | View |
B-E | B-E | K147 | Y31 | K147 | Y31 | Hydrophobic | Hydrophobic | 0.29 | View |
B-E | B-E | L249 | I93 | L249 | I93 | Hydrophobic | Hydrophobic | 1.14 | View |
B-E | B-E | K147 | H30 | K147 | H30 | Hydrogen Bonds | Hydrogen Bonds | 0.18 | View |
B-E | B-E | P251 | W97 | P251 | W97 | Hydrophobic | Hydrophobic | 0.38 | View |
B-E | B-E | K147 | A28 | K147 | A28 | Hydrogen Bonds | Hydrogen Bonds | 0.47 | View |
B-E | B-E | F140 | I93 | F140 | I93 | Hydrophobic | Hydrophobic | 0.73 | View |
B-E | B-E | E156 | I93 | E156 | I93 | Hydrophobic | Hydrophobic | 1.45 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7LY3 | B-E | R246 | H30 | Repulsive, Hydrogen Bonds | 3.50 | View |
7LY3 | B-E | R246 | H30 | Repulsive | 4.25 | View |
7LY3 | B-E | R246 | H30 | Repulsive | 3.39 | View |
7LY3 | B-E | R246 | H30 | Repulsive | 4.56 | View |
7LY3 | B-E | R246 | H30 | Repulsive, Hydrogen Bonds | 3.66 | View |
7LY3 | B-E | R246 | H30 | Repulsive | 5.30 | View |
7LY3 | B-E | R246 | H30 | Repulsive, Hydrogen Bonds | 3.76 | View |
7LY3 | B-E | R246 | H30 | Repulsive | 4.65 | View |
7LY3 | B-E | R246 | A90 | Hydrogen Bonds | 3.03 | View |
7LY3 | B-E | R246 | D91 | Hydrogen Bonds | 3.13 | View |
7LY3 | B-E | R246 | D91 | Hydrogen Bonds | 3.49 | View |
7LY3 | B-E | R246 | S92 | Hydrogen Bonds | 3.51 | View |
7LY3_africa_mut | B-E | F140 | I93 | Hydrophobic | 4.41 | View |
7LY3_africa_mut | B-E | I246 | I93 | Hydrophobic | 4.48 | View |
7LY3_africa_mut | B-E | L249 | I93 | Hydrophobic | 3.85 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |