Execution time: 29.0 seconds
Match RMSD = 0.49
VTR = 0.02
Average AVD = 0.45 Å
Chains(7LY2.pdb ): J versus M
Chains(7LY2_africa_mut.pdb ) J versus M
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7LY2 | 4470 | 47 | 0 | 13 | 0 | 0 | 2 | 62 |
B7LY2_africa_mut | 4461 | 53 | 0 | 11 | 0 | 0 | 2 | 66 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
J-M | J-M | F456 | Y103 | F456 | Y103 | Aromatic Stacking | Aromatic Stacking | 0.34 | View |
J-M | J-M | Y449 | T30 | Y449 | T30 | Hydrophobic | Hydrophobic | 0.73 | View |
J-M | J-M | F456 | Y103 | F456 | Y103 | Hydrophobic | Hydrophobic | 0.33 | View |
J-M | J-M | L455 | Y103 | L455 | Y103 | Hydrophobic | Hydrophobic | 0.61 | View |
J-M | J-M | Y489 | F102 | Y489 | F102 | Hydrophobic | Hydrophobic | 0.49 | View |
J-M | J-M | Y449 | F29 | Y449 | F29 | Hydrogen Bonds | Hydrogen Bonds | 0.61 | View |
J-M | J-M | Y489 | Y103 | Y489 | Y103 | Hydrophobic | Hydrophobic | 0.29 | View |
J-M | J-M | F490 | I54 | F490 | I54 | Hydrophobic | Hydrophobic | 0.35 | View |
J-M | J-M | F456 | Y103 | F456 | Y103 | Hydrophobic | Hydrophobic | 0.31 | View |
J-M | J-M | Y489 | Y103 | Y489 | Y103 | Hydrophobic | Hydrophobic | 0.5 | View |
J-M | J-M | Y449 | F29 | Y449 | F29 | Hydrophobic | Hydrophobic | 0.51 | View |
J-M | J-M | F490 | I54 | F490 | I54 | Hydrophobic | Hydrophobic | 0.5 | View |
J-M | J-M | Y489 | Y103 | Y489 | Y103 | Hydrophobic | Hydrophobic | 0.52 | View |
J-M | J-M | K444 | S75 | K444 | S75 | Hydrogen Bonds | Hydrogen Bonds | 1.13 | View |
J-M | J-M | F486 | F102 | F486 | F102 | Hydrophobic | Hydrophobic | 0.44 | View |
J-M | J-M | F490 | I54 | F490 | I54 | Hydrophobic | Hydrophobic | 0.22 | View |
J-M | J-M | F490 | I54 | F490 | I54 | Hydrophobic | Hydrophobic | 0.54 | View |
J-M | J-M | Q493 | Y103 | Q493 | Y103 | Hydrogen Bonds | Hydrogen Bonds | 0.59 | View |
J-M | J-M | Y449 | F29 | Y449 | F29 | Hydrophobic | Hydrophobic | 0.61 | View |
J-M | J-M | F486 | Y109 | F486 | Y109 | Hydrophobic | Hydrophobic | 0.29 | View |
J-M | J-M | F456 | Y103 | F456 | Y103 | Hydrophobic | Hydrophobic | 0.33 | View |
J-M | J-M | F486 | F102 | F486 | F102 | Hydrophobic | Hydrophobic | 0.35 | View |
J-M | J-M | F456 | Y103 | F456 | Y103 | Hydrophobic | Hydrophobic | 0.31 | View |
J-M | J-M | Y449 | Y27 | Y449 | Y27 | Hydrogen Bonds | Hydrogen Bonds | 0.63 | View |
J-M | J-M | Q493 | T30 | Q493 | T30 | Hydrogen Bonds | Hydrogen Bonds | 0.52 | View |
J-M | J-M | L455 | Y103 | L455 | Y103 | Hydrophobic | Hydrophobic | 0.53 | View |
J-M | J-M | Y449 | T77 | Y449 | T77 | Hydrophobic | Hydrophobic | 0.66 | View |
J-M | J-M | F486 | F102 | F486 | F102 | Hydrophobic | Hydrophobic | 0.33 | View |
J-M | J-M | Y489 | F102 | Y489 | F102 | Hydrophobic | Hydrophobic | 0.51 | View |
J-M | J-M | F456 | Y103 | F456 | Y103 | Hydrophobic | Hydrophobic | 0.4 | View |
J-M | J-M | F456 | Y103 | F456 | Y103 | Hydrophobic | Hydrophobic | 0.32 | View |
J-M | J-M | F486 | F102 | F486 | F102 | Hydrophobic | Hydrophobic | 0.46 | View |
J-M | J-M | Y449 | T77 | Y449 | T77 | Hydrophobic | Hydrophobic | 0.7 | View |
J-M | J-M | F486 | Y109 | F486 | Y109 | Hydrophobic | Hydrophobic | 0.37 | View |
J-M | J-M | F490 | I54 | F490 | I54 | Hydrophobic | Hydrophobic | 0.26 | View |
J-M | J-M | Y449 | T30 | Y449 | T30 | Hydrophobic | Hydrophobic | 0.67 | View |
J-M | J-M | Y489 | Y103 | Y489 | Y103 | Hydrophobic | Hydrophobic | 0.33 | View |
J-M | J-M | L455 | Y103 | L455 | Y103 | Hydrophobic | Hydrophobic | 0.6 | View |
J-M | J-M | Y489 | Y103 | Y489 | Y103 | Aromatic Stacking | Aromatic Stacking | 0.28 | View |
J-M | J-M | L452 | I54 | L452 | I54 | Hydrophobic | Hydrophobic | 0.55 | View |
J-M | J-M | F490 | I54 | F490 | I54 | Hydrophobic | Hydrophobic | 0.2 | View |
J-M | J-M | F490 | I54 | F490 | I54 | Hydrophobic | Hydrophobic | 0.14 | View |
J-M | J-M | Y489 | F102 | Y489 | F102 | Hydrogen Bonds | Hydrogen Bonds | 0.37 | View |
J-M | J-M | F456 | Y103 | F456 | Y103 | Hydrophobic | Hydrophobic | 0.32 | View |
J-M | J-M | Y489 | Y103 | Y489 | Y103 | Hydrophobic | Hydrophobic | 0.35 | View |
J-M | J-M | E484 | W50 | K484 | W50 | Hydrophobic | Hydrophobic | 0.93 | View |
J-M | J-M | F456 | Y103 | F456 | Y103 | Hydrophobic | Hydrophobic | 0.29 | View |
J-M | J-M | Q493 | T30 | Q493 | T30 | Hydrogen Bonds | Hydrogen Bonds | 0.53 | View |
J-M | J-M | Y449 | T30 | Y449 | T30 | Hydrophobic | Hydrophobic | 0.55 | View |
J-M | J-M | Y449 | T30 | Y449 | T30 | Hydrophobic | Hydrophobic | 0.59 | View |
J-M | J-M | Y489 | Y103 | Y489 | Y103 | Hydrophobic | Hydrophobic | 0.38 | View |
J-M | J-M | S494 | T30 | S494 | T30 | Hydrogen Bonds | Hydrogen Bonds | 0.28 | View |
J-M | J-M | Y449 | T28 | Y449 | T28 | Hydrophobic | Hydrophobic | 0.67 | View |
J-M | J-M | F456 | Y103 | F456 | Y103 | Hydrophobic | Hydrophobic | 0.36 | View |
J-M | J-M | F456 | Y103 | F456 | Y103 | Hydrophobic | Hydrophobic | 0.39 | View |
J-M | J-M | Y489 | Y103 | Y489 | Y103 | Hydrophobic | Hydrophobic | 0.25 | View |
J-M | J-M | F456 | Y103 | F456 | Y103 | Hydrophobic | Hydrophobic | 0.29 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7LY2 | J-M | E484 | Y33 | Hydrogen Bonds | 3.63 | View |
7LY2 | J-M | E484 | N52 | Hydrogen Bonds | 2.95 | View |
7LY2 | J-M | E484 | N52 | Hydrogen Bonds | 3.88 | View |
7LY2 | J-M | E484 | S55 | Hydrogen Bonds | 2.78 | View |
7LY2 | J-M | E484 | G57 | Hydrogen Bonds | 3.80 | View |
7LY2_africa_mut | J-M | Y449 | T77 | Hydrophobic | 4.44 | View |
7LY2_africa_mut | J-M | L455 | Y103 | Hydrophobic | 4.41 | View |
7LY2_africa_mut | J-M | L455 | Y103 | Hydrophobic | 4.42 | View |
7LY2_africa_mut | J-M | K484 | Y33 | Hydrogen Bonds | 3.05 | View |
7LY2_africa_mut | J-M | Y489 | Y103 | Hydrophobic | 4.17 | View |
7LY2_africa_mut | J-M | Y489 | Y103 | Hydrophobic | 4.02 | View |
7LY2_africa_mut | J-M | Y489 | Y103 | Hydrophobic | 4.38 | View |
7LY2_africa_mut | J-M | S494 | T30 | Hydrogen Bonds | 3.78 | View |
7LY2_africa_mut | J-M | S494 | T30 | Hydrogen Bonds | 3.88 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |