Execution time: 30.0 seconds
Match RMSD = 0.45
VTR = 0.01
Average AVD = 0.42 Å
Chains(7LY2.pdb ): B versus M
Chains(7LY2_africa_mut.pdb ) B versus M
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7LY2 | 4470 | 33 | 0 | 2 | 0 | 0 | 3 | 38 |
B7LY2_africa_mut | 4461 | 35 | 0 | 3 | 0 | 0 | 3 | 41 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
B-M | B-M | F374 | W106 | F374 | W106 | Hydrophobic | Hydrophobic | 0.38 | View |
B-M | B-M | F342 | F105 | F342 | F105 | Aromatic Stacking | Aromatic Stacking | 0.36 | View |
B-M | B-M | W436 | W106 | W436 | W106 | Hydrophobic | Hydrophobic | 0.31 | View |
B-M | B-M | F374 | W106 | F374 | W106 | Hydrophobic | Hydrophobic | 0.32 | View |
B-M | B-M | W436 | W106 | W436 | W106 | Hydrophobic | Hydrophobic | 0.27 | View |
B-M | B-M | W436 | W106 | W436 | W106 | Hydrophobic | Hydrophobic | 0.53 | View |
B-M | B-M | A372 | Y103 | A372 | Y103 | Hydrophobic | Hydrophobic | 0.27 | View |
B-M | B-M | F374 | F105 | F374 | F105 | Hydrophobic | Hydrophobic | 0.55 | View |
B-M | B-M | F342 | F105 | F342 | F105 | Hydrophobic | Hydrophobic | 0.42 | View |
B-M | B-M | W436 | W106 | W436 | W106 | Hydrophobic | Hydrophobic | 0.27 | View |
B-M | B-M | W436 | W106 | W436 | W106 | Hydrophobic | Hydrophobic | 0.32 | View |
B-M | B-M | F374 | W106 | F374 | W106 | Hydrophobic | Hydrophobic | 0.57 | View |
B-M | B-M | L368 | F105 | L368 | F105 | Hydrophobic | Hydrophobic | 0.55 | View |
B-M | B-M | F342 | F105 | F342 | F105 | Hydrophobic | Hydrophobic | 0.38 | View |
B-M | B-M | F374 | W106 | F374 | W106 | Hydrophobic | Hydrophobic | 0.3 | View |
B-M | B-M | W436 | W106 | W436 | W106 | Hydrophobic | Hydrophobic | 0.29 | View |
B-M | B-M | L368 | F105 | L368 | F105 | Hydrophobic | Hydrophobic | 0.5 | View |
B-M | B-M | F374 | F105 | F374 | F105 | Hydrophobic | Hydrophobic | 0.32 | View |
B-M | B-M | F374 | F105 | F374 | F105 | Aromatic Stacking | Aromatic Stacking | 0.35 | View |
B-M | B-M | W436 | W106 | W436 | W106 | Hydrophobic | Hydrophobic | 0.54 | View |
B-M | B-M | F374 | F105 | F374 | F105 | Hydrophobic | Hydrophobic | 0.49 | View |
B-M | B-M | F374 | F105 | F374 | F105 | Hydrophobic | Hydrophobic | 0.37 | View |
B-M | B-M | W436 | W106 | W436 | W106 | Hydrophobic | Hydrophobic | 0.54 | View |
B-M | B-M | F374 | F105 | F374 | F105 | Hydrophobic | Hydrophobic | 0.5 | View |
B-M | B-M | F342 | W106 | F342 | W106 | Hydrogen Bonds | Hydrogen Bonds | 1.02 | View |
B-M | B-M | W436 | W106 | W436 | W106 | Hydrophobic | Hydrophobic | 0.27 | View |
B-M | B-M | W436 | W106 | W436 | W106 | Aromatic Stacking | Aromatic Stacking | 0.46 | View |
B-M | B-M | V367 | F105 | V367 | F105 | Hydrophobic | Hydrophobic | 0.58 | View |
B-M | B-M | F374 | F105 | F374 | F105 | Hydrophobic | Hydrophobic | 0.36 | View |
B-M | B-M | W436 | W106 | W436 | W106 | Hydrophobic | Hydrophobic | 0.59 | View |
B-M | B-M | A372 | Y103 | A372 | Y103 | Hydrophobic | Hydrophobic | 0.2 | View |
B-M | B-M | W436 | W106 | W436 | W106 | Hydrophobic | Hydrophobic | 0.54 | View |
B-M | B-M | F374 | F105 | F374 | F105 | Hydrophobic | Hydrophobic | 0.45 | View |
B-M | B-M | F342 | F105 | F342 | F105 | Hydrophobic | Hydrophobic | 0.42 | View |
B-M | B-M | S373 | F105 | S373 | F105 | Hydrogen Bonds | Hydrogen Bonds | 0.2 | View |
B-M | B-M | F374 | F105 | F374 | F105 | Hydrophobic | Hydrophobic | 0.44 | View |
B-M | B-M | F374 | F105 | F374 | F105 | Hydrophobic | Hydrophobic | 0.42 | View |
B-M | B-M | F342 | F105 | F342 | F105 | Hydrophobic | Hydrophobic | 0.38 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |