Execution time: 4.0 seconds
Match RMSD = 1.18
VTR = 0.13
Average AVD = 1.09 Å
Chains(7LY0.pdb ): A versus H
Chains(7LY0_africa_mut.pdb ) A versus H
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7LY0 | 354 | 21 | 0 | 10 | 0 | 0 | 0 | 31 |
B7LY0_africa_mut | 351 | 31 | 0 | 9 | 0 | 0 | 0 | 40 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
A-H | A-H | T250 | W104 | T250 | W104 | Hydrophobic | Hydrophobic | 1.17 | View |
A-H | A-H | P251 | V50 | P251 | V50 | Hydrophobic | Hydrophobic | 1.28 | View |
A-H | A-H | N17 | S56 | N17 | S56 | Hydrogen Bonds | Hydrogen Bonds | 0.55 | View |
A-H | A-H | L249 | W104 | L249 | W104 | Hydrophobic | Hydrophobic | 0.74 | View |
A-H | A-H | T250 | W104 | T250 | W104 | Hydrophobic | Hydrophobic | 1.21 | View |
A-H | A-H | N17 | N57 | N17 | N57 | Hydrogen Bonds | Hydrogen Bonds | 0.55 | View |
A-H | A-H | L249 | W52 | L249 | W52 | Hydrophobic | Hydrophobic | 0.86 | View |
A-H | A-H | N17 | N57 | N17 | N57 | Hydrogen Bonds | Hydrogen Bonds | 0.62 | View |
A-H | A-H | P251 | A99 | P251 | A99 | Hydrophobic | Hydrophobic | 1.51 | View |
A-H | A-H | T250 | W104 | T250 | W104 | Hydrophobic | Hydrophobic | 1.95 | View |
A-H | A-H | P251 | G33 | P251 | G33 | Hydrogen Bonds | Hydrogen Bonds | 1.55 | View |
A-H | A-H | N17 | N57 | N17 | N57 | Hydrogen Bonds | Hydrogen Bonds | 0.43 | View |
A-H | A-H | T250 | W104 | T250 | W104 | Hydrophobic | Hydrophobic | 1.2 | View |
A-H | A-H | P251 | V50 | P251 | V50 | Hydrophobic | Hydrophobic | 1.1 | View |
A-H | A-H | T250 | W104 | T250 | W104 | Hydrophobic | Hydrophobic | 1.32 | View |
A-H | A-H | D253 | S31 | D253 | Y32 | Hydrogen Bonds | Hydrogen Bonds | 1.99 | View |
A-H | A-H | P251 | W52 | P251 | W52 | Hydrophobic | Hydrophobic | 1.12 | View |
A-H | A-H | N17 | S56 | N17 | S56 | Hydrogen Bonds | Hydrogen Bonds | 0.61 | View |
A-H | A-H | V16 | W52 | V16 | W52 | Hydrophobic | Hydrophobic | 0.7 | View |
A-H | A-H | P251 | Y53 | P251 | Y53 | Hydrogen Bonds | Hydrogen Bonds | 1.45 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7LY0 | A-H | L18 | W52 | Hydrophobic | 4.41 | View |
7LY0 | A-H | R246 | W104 | Hydrophobic | 4.14 | View |
7LY0 | A-H | R246 | W104 | Hydrophobic | 4.15 | View |
7LY0 | A-H | D253 | S31 | Hydrogen Bonds | 2.80 | View |
7LY0 | A-H | D253 | Y53 | Hydrophobic | 4.42 | View |
7LY0 | A-H | D253 | Y53 | Hydrophobic | 3.71 | View |
7LY0 | A-H | D253 | Y53 | Hydrophobic | 3.87 | View |
7LY0 | A-H | D253 | Y53 | Hydrophobic | 3.60 | View |
7LY0 | A-H | D253 | Y53 | Hydrophobic | 3.93 | View |
7LY0 | A-H | D253 | Y53 | Hydrophobic | 3.67 | View |
7LY0 | A-H | S254 | G102 | Hydrogen Bonds | 3.66 | View |
7LY0_africa_mut | A-H | V16 | W52 | Hydrophobic | 4.22 | View |
7LY0_africa_mut | A-H | F18 | W52 | Hydrophobic | 4.26 | View |
7LY0_africa_mut | A-H | F18 | W52 | Hydrophobic | 3.71 | View |
7LY0_africa_mut | A-H | F18 | W52 | Hydrophobic | 2.94 | View |
7LY0_africa_mut | A-H | F18 | W52 | Hydrophobic | 3.83 | View |
7LY0_africa_mut | A-H | F18 | W52 | Hydrophobic | 3.53 | View |
7LY0_africa_mut | A-H | F18 | W52 | Hydrophobic | 2.97 | View |
7LY0_africa_mut | A-H | F18 | W52 | Hydrophobic | 4.07 | View |
7LY0_africa_mut | A-H | F18 | W52 | Hydrophobic | 4.30 | View |
7LY0_africa_mut | A-H | F18 | Y53 | Hydrophobic | 4.28 | View |
7LY0_africa_mut | A-H | F18 | Y53 | Hydrophobic | 4.19 | View |
7LY0_africa_mut | A-H | K77 | Y53 | Hydrophobic | 4.06 | View |
7LY0_africa_mut | A-H | K77 | Y53 | Hydrophobic | 4.30 | View |
7LY0_africa_mut | A-H | K77 | Y53 | Hydrophobic | 3.97 | View |
7LY0_africa_mut | A-H | K77 | Y53 | Hydrophobic | 4.16 | View |
7LY0_africa_mut | A-H | K77 | Y53 | Hydrophobic | 3.09 | View |
7LY0_africa_mut | A-H | L249 | W52 | Hydrophobic | 4.42 | View |
7LY0_africa_mut | A-H | L249 | W52 | Hydrophobic | 4.18 | View |
7LY0_africa_mut | A-H | L249 | W52 | Hydrogen Bonds | 3.73 | View |
7LY0_africa_mut | A-H | P251 | V50 | Hydrophobic | 4.13 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |