Execution time: 27.0 seconds
Match RMSD = 1.02
VTR = 0.1
Average AVD = 0.94 Å
Chains(7LXZ.pdb ): A versus H
Chains(7LXZ_africa_mut.pdb ) A versus H
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7LXZ | 4557 | 22 | 0 | 10 | 0 | 0 | 1 | 33 |
B7LXZ_africa_mut | 4548 | 24 | 1 | 14 | 0 | 0 | 0 | 39 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
A-H | A-H | Y144 | W105 | Y144 | W105 | Hydrophobic | Hydrophobic | 1.12 | View |
A-H | A-H | Y144 | W105 | Y144 | W105 | Hydrophobic | Hydrophobic | 0.83 | View |
A-H | A-H | Y144 | W105 | Y144 | W105 | Hydrophobic | Hydrophobic | 0.56 | View |
A-H | A-H | T250 | W105 | T250 | W105 | Hydrogen Bonds | Hydrogen Bonds | 0.94 | View |
A-H | A-H | Y144 | W105 | Y144 | W105 | Hydrophobic | Hydrophobic | 0.9 | View |
A-H | A-H | Y144 | L106 | Y144 | L106 | Hydrophobic | Hydrophobic | 0.95 | View |
A-H | A-H | P251 | D31 | P251 | D31 | Hydrophobic | Hydrophobic | 0.51 | View |
A-H | A-H | G252 | K104 | G252 | K104 | Hydrogen Bonds | Hydrogen Bonds | 0.57 | View |
A-H | A-H | Y144 | W105 | Y144 | W105 | Hydrophobic | Hydrophobic | 1.13 | View |
A-H | A-H | G252 | W105 | G252 | W105 | Hydrogen Bonds | Hydrogen Bonds | 0.51 | View |
A-H | A-H | P251 | D31 | P251 | D31 | Hydrophobic | Hydrophobic | 0.33 | View |
A-H | A-H | Y144 | W105 | Y144 | W105 | Hydrophobic | Hydrophobic | 1.76 | View |
A-H | A-H | P251 | Y103 | P251 | Y103 | Hydrophobic | Hydrophobic | 1.11 | View |
A-H | A-H | Y144 | W105 | Y144 | W105 | Hydrophobic | Hydrophobic | 1.42 | View |
A-H | A-H | D253 | S53 | D253 | S53 | Hydrogen Bonds | Hydrogen Bonds | 0.8 | View |
A-H | A-H | Y144 | W105 | Y144 | W105 | Hydrogen Bonds | Hydrogen Bonds | 0.73 | View |
A-H | A-H | G252 | A102 | G252 | A102 | Hydrogen Bonds | Hydrogen Bonds | 0.76 | View |
A-H | A-H | G252 | D31 | G252 | D31 | Hydrogen Bonds | Hydrogen Bonds | 0.92 | View |
A-H | A-H | D253 | S54 | D253 | S54 | Hydrogen Bonds | Hydrogen Bonds | 0.82 | View |
A-H | A-H | R246 | W105 | I246 | W105 | Hydrophobic | Hydrophobic | 1.89 | View |
A-H | A-H | D253 | K104 | D253 | K104 | Hydrophobic | Hydrophobic | 0.56 | View |
A-H | A-H | G257 | W105 | G257 | W105 | Hydrogen Bonds | Hydrogen Bonds | 1.12 | View |
A-H | A-H | Y144 | W105 | Y144 | W105 | Aromatic Stacking | 0.67 | View | |
A-H | A-H | Y144 | W105 | Y144 | W105 | Hydrophobic | Hydrophobic | 1.76 | View |
A-H | A-H | P251 | A102 | P251 | A102 | Hydrophobic | Hydrophobic | 0.82 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7LXZ | A-H | Y144 | L106 | Hydrophobic | 3.67 | View |
7LXZ | A-H | R246 | W105 | Hydrophobic | 4.15 | View |
7LXZ | A-H | R246 | W105 | Hydrophobic | 4.02 | View |
7LXZ | A-H | R246 | W105 | Hydrophobic | 4.00 | View |
7LXZ | A-H | R246 | W105 | Hydrophobic | 3.87 | View |
7LXZ | A-H | R246 | W105 | Hydrophobic | 3.86 | View |
7LXZ | A-H | R246 | W105 | Hydrophobic | 4.41 | View |
7LXZ | A-H | Y248 | Y103 | Hydrogen Bonds | 2.71 | View |
7LXZ_africa_mut | A-H | Y248 | Y103 | Hydrophobic | 4.37 | View |
7LXZ_africa_mut | A-H | Y248 | Y103 | Hydrophobic | 4.01 | View |
7LXZ_africa_mut | A-H | Y248 | Y103 | Hydrophobic | 4.23 | View |
7LXZ_africa_mut | A-H | Y248 | W105 | Hydrophobic | 3.15 | View |
7LXZ_africa_mut | A-H | Y248 | W105 | Hydrophobic | 3.52 | View |
7LXZ_africa_mut | A-H | P251 | Y103 | Hydrophobic | 4.47 | View |
7LXZ_africa_mut | A-H | P251 | Y103 | Hydrophobic | 4.21 | View |
7LXZ_africa_mut | A-H | G252 | D31 | Hydrogen Bonds | 3.03 | View |
7LXZ_africa_mut | A-H | D253 | S52 | Hydrogen Bonds | 2.98 | View |
7LXZ_africa_mut | A-H | D253 | K104 | Hydrophobic | 4.19 | View |
7LXZ_africa_mut | A-H | D253 | K104 | Hydrophobic | 3.82 | View |
7LXZ_africa_mut | A-H | D253 | K104 | Attractive | 5.70 | View |
7LXZ_africa_mut | A-H | S255 | S54 | Hydrogen Bonds | 3.69 | View |
7LXZ_africa_mut | A-H | S255 | N56 | Hydrogen Bonds | 3.36 | View |
7LXZ_africa_mut | A-H | S256 | S53 | Hydrogen Bonds | 3.56 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |