Execution time: 25.0 seconds
Match RMSD = 0.39
VTR = 0.0
Average AVD = 0.36 Å
Chains(7LSS.pdb ): B versus H
Chains(7LSS_africa_mut.pdb ) B versus H
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7LSS | 2774 | 20 | 4 | 8 | 0 | 1 | 0 | 33 |
B7LSS_africa_mut | 2771 | 21 | 4 | 8 | 0 | 1 | 0 | 34 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
B-H | B-H | K444 | Y52 | K444 | Y52 | Hydrophobic | Hydrophobic | 0.22 | View |
B-H | B-H | P499 | I97 | P499 | I97 | Hydrophobic | Hydrophobic | 0.32 | View |
B-H | B-H | K444 | D54 | K444 | D54 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 0.62 | View |
B-H | B-H | K444 | Y52 | K444 | Y52 | Hydrophobic | Hydrophobic | 0.21 | View |
B-H | B-H | K444 | Y52 | K444 | Y52 | Hydrophobic | Hydrophobic | 0.26 | View |
B-H | B-H | N450 | D54 | N450 | D54 | Hydrogen Bonds | Hydrogen Bonds | 0.66 | View |
B-H | B-H | K444 | Y52 | K444 | Y52 | Hydrophobic | Hydrophobic | 0.25 | View |
B-H | B-H | V445 | Y52 | V445 | Y52 | Hydrogen Bonds | Hydrogen Bonds | 0.16 | View |
B-H | B-H | G446 | R58 | G446 | R58 | Hydrogen Bonds | Hydrogen Bonds | 0.56 | View |
B-H | B-H | K444 | Y52 | K444 | Y52 | Hydrophobic | Hydrophobic | 0.18 | View |
B-H | B-H | K444 | Y52 | K444 | Y52 | Hydrophobic | Hydrophobic | 0.19 | View |
B-H | B-H | K444 | R58 | K444 | R58 | Repulsive | Repulsive | 0.31 | View |
B-H | B-H | V445 | R58 | V445 | R58 | Hydrophobic | Hydrophobic | 0.27 | View |
B-H | B-H | V445 | L50 | V445 | L50 | Hydrophobic | Hydrophobic | 0.42 | View |
B-H | B-H | P499 | I97 | P499 | I97 | Hydrophobic | Hydrophobic | 0.43 | View |
B-H | B-H | G447 | R58 | G447 | R58 | Hydrogen Bonds | Hydrogen Bonds | 0.23 | View |
B-H | B-H | K444 | Y52 | K444 | Y52 | Hydrophobic | Hydrophobic | 0.31 | View |
B-H | B-H | K444 | Y52 | K444 | Y52 | Hydrophobic | Hydrophobic | 0.27 | View |
B-H | B-H | V445 | L50 | V445 | L50 | Hydrophobic | Hydrophobic | 0.49 | View |
B-H | B-H | K444 | D54 | K444 | D54 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 0.61 | View |
B-H | B-H | N440 | E98 | N440 | E98 | Hydrophobic | Hydrophobic | 0.32 | View |
B-H | B-H | P499 | I97 | P499 | I97 | Hydrophobic | Hydrophobic | 0.43 | View |
B-H | B-H | K444 | D56 | K444 | D56 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 0.45 | View |
B-H | B-H | K444 | Y52 | K444 | Y52 | Hydrophobic | Hydrophobic | 0.37 | View |
B-H | B-H | V445 | Y52 | V445 | Y52 | Hydrophobic | Hydrophobic | 0.28 | View |
B-H | B-H | V445 | L50 | V445 | L50 | Hydrophobic | Hydrophobic | 0.39 | View |
B-H | B-H | G446 | R58 | G446 | R58 | Hydrogen Bonds | Hydrogen Bonds | 0.58 | View |
B-H | B-H | K444 | D56 | K444 | D56 | Attractive | Attractive | 0.46 | View |
B-H | B-H | V445 | R58 | V445 | R58 | Hydrophobic | Hydrophobic | 0.27 | View |
B-H | B-H | K444 | Y52 | K444 | Y52 | Hydrophobic | Hydrophobic | 0.28 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7LSS_africa_mut | B-H | V445 | L50 | Hydrophobic | 4.41 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |