Execution time: 27.0 seconds
Match RMSD = 1.04
VTR = 0.16
Average AVD = 0.96 Å
Chains(7LS9.pdb ): A versus H
Chains(7LS9_africa_mut.pdb ) A versus H
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7LS9 | 3948 | 8 | 0 | 6 | 0 | 0 | 0 | 14 |
B7LS9_africa_mut | 3939 | 19 | 0 | 5 | 0 | 0 | 1 | 25 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
A-H | A-H | V445 | H96 | V445 | H96 | Hydrogen Bonds | Hydrogen Bonds | 1.64 | View |
A-H | A-H | K444 | W98 | K444 | W98 | Hydrophobic | Hydrophobic | 0.67 | View |
A-H | A-H | K444 | W98 | K444 | W98 | Hydrophobic | Hydrophobic | 0.55 | View |
A-H | A-H | Y449 | W98 | Y449 | W98 | Hydrogen Bonds | Hydrogen Bonds | 1.08 | View |
A-H | A-H | K444 | W98 | K444 | W98 | Hydrophobic | Hydrophobic | 0.68 | View |
A-H | A-H | G447 | H96 | G447 | H96 | Hydrogen Bonds | Hydrogen Bonds | 1.6 | View |
A-H | A-H | K444 | W98 | K444 | W98 | Hydrophobic | Hydrophobic | 0.52 | View |
A-H | A-H | K444 | W98 | K444 | W98 | Hydrophobic | Hydrophobic | 0.73 | View |
A-H | A-H | N450 | W98 | N450 | W98 | Hydrogen Bonds | Hydrogen Bonds | 1.16 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7LS9 | A-H | G446 | H96 | Hydrogen Bonds | 3.31 | View |
7LS9 | A-H | G447 | H96 | Hydrogen Bonds | 3.86 | View |
7LS9 | A-H | N450 | Y100 | Hydrophobic | 4.27 | View |
7LS9 | A-H | L452 | Y100 | Hydrophobic | 4.30 | View |
7LS9 | A-H | L452 | Y100 | Hydrophobic | 4.36 | View |
7LS9_africa_mut | A-H | K444 | W98 | Hydrophobic | 4.10 | View |
7LS9_africa_mut | A-H | K444 | W98 | Hydrophobic | 4.30 | View |
7LS9_africa_mut | A-H | K444 | W98 | Hydrophobic | 4.20 | View |
7LS9_africa_mut | A-H | K444 | W98 | Hydrophobic | 4.13 | View |
7LS9_africa_mut | A-H | Y449 | A99 | Hydrophobic | 3.92 | View |
7LS9_africa_mut | A-H | Y449 | A99 | Hydrophobic | 3.66 | View |
7LS9_africa_mut | A-H | Y449 | A99 | Hydrophobic | 2.93 | View |
7LS9_africa_mut | A-H | Y449 | A99 | Hydrophobic | 3.55 | View |
7LS9_africa_mut | A-H | Y449 | Y100 | Hydrophobic | 3.96 | View |
7LS9_africa_mut | A-H | Y449 | Y100 | Hydrophobic | 3.74 | View |
7LS9_africa_mut | A-H | Y449 | Y100 | Aromatic Stacking | 5.88 | View |
7LS9_africa_mut | A-H | Y449 | Y100 | Hydrophobic | 4.10 | View |
7LS9_africa_mut | A-H | Y449 | Y100 | Hydrophobic | 4.32 | View |
7LS9_africa_mut | A-H | Y449 | Y100 | Hydrophobic | 4.13 | View |
7LS9_africa_mut | A-H | Y449 | Y100 | Hydrophobic | 4.43 | View |
7LS9_africa_mut | A-H | N450 | W98 | Hydrogen Bonds | 3.85 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |