Execution time: 27.0 seconds
Match RMSD = 1.46
VTR = 0.13
Average AVD = 1.43 Å
Chains(7LQV.pdb ): C versus Z
Chains(7LQV_africa_mut.pdb ) C versus Z
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7LQV | 3941 | 12 | 2 | 8 | 0 | 1 | 0 | 23 |
B7LQV_africa_mut | 3932 | 20 | 2 | 7 | 0 | 0 | 0 | 29 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
C-Z | C-Z | L249 | Y49 | L249 | Y49 | Hydrophobic | Hydrophobic | 1.49 | View |
C-Z | C-Z | L249 | S56 | L249 | S56 | Hydrogen Bonds | Hydrogen Bonds | 1.88 | View |
C-Z | C-Z | L249 | P55 | L249 | P55 | Hydrophobic | Hydrophobic | 1.29 | View |
C-Z | C-Z | P251 | I58 | P251 | I58 | Hydrophobic | Hydrophobic | 1.49 | View |
C-Z | C-Z | L249 | Y49 | L249 | Y49 | Hydrogen Bonds | Hydrogen Bonds | 1.24 | View |
C-Z | C-Z | L249 | L46 | L249 | L46 | Hydrophobic | Hydrophobic | 1.43 | View |
C-Z | C-Z | K147 | Y32 | K147 | Y32 | Hydrogen Bonds | Hydrogen Bonds | 1.0 | View |
C-Z | C-Z | K147 | D30 | K147 | D30 | Attractive | Attractive | 1.25 | View |
C-Z | C-Z | T250 | S56 | T250 | G57 | Hydrogen Bonds | Hydrogen Bonds | 1.5 | View |
C-Z | C-Z | K147 | D30 | K147 | D30 | Attractive | Attractive | 1.04 | View |
C-Z | C-Z | K147 | Y32 | K147 | Y32 | Hydrophobic | Hydrophobic | 1.38 | View |
C-Z | C-Z | L249 | Y49 | L249 | Y49 | Hydrophobic | Hydrophobic | 1.52 | View |
C-Z | C-Z | L249 | Y49 | L249 | Y49 | Hydrophobic | Hydrophobic | 1.54 | View |
C-Z | C-Z | L249 | Y49 | L249 | Y49 | Hydrophobic | Hydrophobic | 1.46 | View |
C-Z | C-Z | T250 | S56 | T250 | S56 | Hydrogen Bonds | Hydrogen Bonds | 1.71 | View |
C-Z | C-Z | P251 | P55 | P251 | P55 | Hydrophobic | Hydrophobic | 1.92 | View |
C-Z | C-Z | K147 | Y32 | K147 | Y32 | Hydrophobic | Hydrophobic | 0.77 | View |
C-Z | C-Z | P251 | P55 | P251 | P55 | Hydrophobic | Hydrophobic | 1.78 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7LQV | C-Z | H245 | K53 | Repulsive | 5.84 | View |
7LQV | C-Z | R246 | K53 | Hydrogen Bonds | 3.70 | View |
7LQV | C-Z | S247 | K53 | Hydrogen Bonds | 2.77 | View |
7LQV | C-Z | L249 | Y49 | Hydrogen Bonds | 3.41 | View |
7LQV | C-Z | P251 | I58 | Hydrophobic | 4.00 | View |
7LQV_africa_mut | C-Z | K147 | Y32 | Hydrophobic | 4.28 | View |
7LQV_africa_mut | C-Z | K147 | Y32 | Hydrophobic | 4.25 | View |
7LQV_africa_mut | C-Z | K147 | Y32 | Hydrophobic | 3.71 | View |
7LQV_africa_mut | C-Z | L249 | Y49 | Hydrogen Bonds | 3.49 | View |
7LQV_africa_mut | C-Z | L249 | Y49 | Hydrophobic | 4.32 | View |
7LQV_africa_mut | C-Z | L249 | Y49 | Hydrophobic | 4.15 | View |
7LQV_africa_mut | C-Z | L249 | Y49 | Hydrophobic | 4.23 | View |
7LQV_africa_mut | C-Z | L249 | P55 | Hydrophobic | 4.36 | View |
7LQV_africa_mut | C-Z | T250 | S56 | Hydrogen Bonds | 2.58 | View |
7LQV_africa_mut | C-Z | P251 | P55 | Hydrophobic | 4.39 | View |
7LQV_africa_mut | C-Z | P251 | I58 | Hydrophobic | 3.95 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |