Execution time: 10.0 seconds
Match RMSD = 1.0
VTR = 0.1
Average AVD = 0.95 Å
Chains(7LOP.pdb ): Z versus V
Chains(7LOP_africa_mut.pdb ) Z versus V
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7LOP | 2097 | 8 | 2 | 3 | 0 | 0 | 0 | 13 |
B7LOP_africa_mut | 2097 | 15 | 2 | 4 | 0 | 0 | 0 | 21 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
V-Z | V-Z | W50 | L390 | W50 | L390 | Hydrophobic | Hydrophobic | 0.9 | View |
V-Z | V-Z | E55 | K386 | E55 | K386 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 0.53 | View |
V-Z | V-Z | W50 | L390 | W50 | L390 | Hydrophobic | Hydrophobic | 0.72 | View |
V-Z | V-Z | Y49 | K386 | Y49 | K386 | Hydrogen Bonds | Hydrogen Bonds | 0.66 | View |
V-Z | V-Z | E55 | K386 | E55 | K386 | Attractive | Attractive Hydrogen Bonds | 0.83 | View |
V-Z | V-Z | W50 | L390 | W50 | L390 | Hydrophobic | Hydrophobic | 1.23 | View |
V-Z | V-Z | W50 | L390 | W50 | L390 | Hydrophobic | Hydrophobic | 0.9 | View |
V-Z | V-Z | W50 | L390 | W50 | L390 | Hydrophobic | Hydrophobic | 1.05 | View |
V-Z | V-Z | Y32 | G381 | Y32 | G381 | Hydrogen Bonds | Hydrogen Bonds | 1.7 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7LOP | V-Z | I28 | F392 | Hydrophobic | 3.87 | View |
7LOP | V-Z | I28 | L517 | Hydrophobic | 4.26 | View |
7LOP | V-Z | I28 | L517 | Hydrophobic | 4.27 | View |
7LOP_africa_mut | V-Z | N29 | L517 | Hydrophobic | 4.17 | View |
7LOP_africa_mut | V-Z | N29 | L517 | Hydrophobic | 3.72 | View |
7LOP_africa_mut | V-Z | K30 | L517 | Hydrophobic | 3.70 | View |
7LOP_africa_mut | V-Z | W50 | V382 | Hydrophobic | 4.29 | View |
7LOP_africa_mut | V-Z | W50 | L390 | Hydrophobic | 4.21 | View |
7LOP_africa_mut | V-Z | W50 | L390 | Hydrophobic | 4.42 | View |
7LOP_africa_mut | V-Z | W50 | L390 | Hydrophobic | 3.77 | View |
7LOP_africa_mut | V-Z | W50 | L390 | Hydrophobic | 3.74 | View |
7LOP_africa_mut | V-Z | W50 | L390 | Hydrophobic | 4.37 | View |
7LOP_africa_mut | V-Z | W50 | F392 | Hydrophobic | 4.20 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |