Execution time: 9.0 seconds
Match RMSD = 1.12
VTR = 0.13
Average AVD = 1.08 Å
Chains(7LM8.pdb ): A versus M
Chains(7LM8_africa_mut.pdb ) A versus M
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7LM8 | 1043 | 7 | 8 | 9 | 0 | 3 | 0 | 27 |
B7LM8_africa_mut | 1043 | 14 | 12 | 18 | 0 | 3 | 0 | 47 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
A-M | A-M | K444 | R58 | K444 | R58 | Repulsive | Repulsive | 0.71 | View |
A-M | A-M | N450 | D56 | N450 | D56 | Hydrogen Bonds | Hydrogen Bonds | 1.13 | View |
A-M | A-M | L441 | R58 | L441 | R58 | Hydrogen Bonds | Hydrogen Bonds | 0.99 | View |
A-M | A-M | D442 | R58 | D442 | R58 | Attractive | Attractive | 0.8 | View |
A-M | A-M | L441 | V98 | L441 | V98 | Hydrophobic | Hydrophobic | 1.7 | View |
A-M | A-M | K444 | R58 | K444 | R58 | Hydrophobic | Hydrophobic | 0.63 | View |
A-M | A-M | D442 | R58 | D442 | R58 | Attractive | Attractive | 0.72 | View |
A-M | A-M | T345 | Y52 | T345 | Y52 | Hydrophobic | Hydrophobic | 1.12 | View |
A-M | A-M | R346 | E54 | R346 | E54 | Attractive | Attractive | 1.57 | View |
A-M | A-M | L441 | V98 | L441 | V98 | Hydrophobic | Hydrophobic | 1.61 | View |
A-M | A-M | N450 | E54 | N450 | E54 | Hydrogen Bonds | Hydrogen Bonds | 0.97 | View |
A-M | A-M | L441 | R58 | L441 | R58 | Hydrogen Bonds | Hydrogen Bonds | 1.28 | View |
A-M | A-M | K444 | R58 | K444 | R58 | Repulsive | Repulsive | 0.89 | View |
A-M | A-M | K444 | D56 | K444 | D56 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 0.9 | View |
A-M | A-M | K444 | R58 | K444 | R58 | Repulsive | Repulsive | 0.88 | View |
A-M | A-M | R346 | E54 | R346 | E54 | Attractive | Attractive | 0.71 | View |
A-M | A-M | N343 | Y99 | N343 | Y99 | Hydrophobic | Hydrophobic | 1.33 | View |
A-M | A-M | R346 | E54 | R346 | E54 | Attractive | Attractive | 0.87 | View |
A-M | A-M | R346 | E54 | R346 | E54 | Attractive | Attractive | 1.41 | View |
A-M | A-M | K444 | T57 | K444 | T57 | Hydrogen Bonds | Hydrogen Bonds | 0.8 | View |
A-M | A-M | L441 | V98 | L441 | V98 | Hydrophobic | Hydrophobic | 1.42 | View |
A-M | A-M | K444 | D56 | K444 | D56 | Attractive | Attractive | 1.05 | View |
A-M | A-M | L441 | V98 | L441 | V98 | Hydrophobic | Hydrophobic | 1.29 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7LM8 | A-M | N343 | S100 | Hydrogen Bonds | 2.86 | View |
7LM8 | A-M | W436 | S100 | Hydrogen Bonds | 2.90 | View |
7LM8 | A-M | N450 | S55 | Hydrogen Bonds | 3.14 | View |
7LM8_africa_mut | A-M | N343 | Y99 | Hydrophobic | 3.36 | View |
7LM8_africa_mut | A-M | N343 | Y99 | Hydrophobic | 4.45 | View |
7LM8_africa_mut | A-M | T345 | R96 | Hydrogen Bonds | 3.10 | View |
7LM8_africa_mut | A-M | T345 | G97 | Hydrogen Bonds | 3.83 | View |
7LM8_africa_mut | A-M | T345 | V98 | Hydrogen Bonds | 3.77 | View |
7LM8_africa_mut | A-M | R346 | E54 | Attractive, Hydrogen Bonds | 2.83 | View |
7LM8_africa_mut | A-M | R346 | E54 | Attractive, Hydrogen Bonds | 3.65 | View |
7LM8_africa_mut | A-M | R346 | E54 | Attractive, Hydrogen Bonds | 3.13 | View |
7LM8_africa_mut | A-M | R346 | E54 | Attractive, Hydrogen Bonds | 4.69 | View |
7LM8_africa_mut | A-M | F347 | V98 | Hydrophobic | 4.41 | View |
7LM8_africa_mut | A-M | N440 | R58 | Hydrogen Bonds | 3.86 | View |
7LM8_africa_mut | A-M | L441 | V98 | Hydrophobic | 3.97 | View |
7LM8_africa_mut | A-M | L441 | V98 | Hydrophobic | 3.32 | View |
7LM8_africa_mut | A-M | L441 | V98 | Hydrophobic | 4.44 | View |
7LM8_africa_mut | A-M | L441 | V98 | Hydrophobic | 4.32 | View |
7LM8_africa_mut | A-M | D442 | R58 | Hydrogen Bonds | 3.71 | View |
7LM8_africa_mut | A-M | D442 | R58 | Hydrogen Bonds | 3.16 | View |
7LM8_africa_mut | A-M | S443 | R58 | Hydrogen Bonds | 2.74 | View |
7LM8_africa_mut | A-M | N448 | D56 | Hydrogen Bonds | 3.88 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |