Execution time: 12.0 seconds
Match RMSD = 1.28
VTR = 0.21
Average AVD = 1.25 Å
Chains(7LM8.pdb ): A versus H
Chains(7LM8_africa_mut.pdb ) A versus H
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7LM8 | 1043 | 19 | 4 | 14 | 0 | 0 | 0 | 37 |
B7LM8_africa_mut | 1043 | 36 | 4 | 19 | 0 | 0 | 1 | 60 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
A-H | A-H | K378 | Y99 | K378 | Y99 | Hydrophobic | Hydrophobic | 1.58 | View |
A-H | A-H | Q414 | Q101 | Q414 | Q101 | Hydrogen Bonds | Hydrogen Bonds | 0.79 | View |
A-H | A-H | D427 | R94 | D427 | R94 | Attractive | Attractive | 1.37 | View |
A-H | A-H | D427 | R94 | D427 | R94 | Attractive | Attractive | 1.18 | View |
A-H | A-H | K378 | Y99 | K378 | Y99 | Hydrophobic | Hydrophobic | 1.01 | View |
A-H | A-H | K378 | Y99 | K378 | Y99 | Hydrophobic | Hydrophobic | 1.17 | View |
A-H | A-H | P412 | Y32 | P412 | Y32 | Hydrogen Bonds | Hydrogen Bonds | 1.51 | View |
A-H | A-H | D427 | R94 | D427 | R94 | Attractive | Attractive | 1.25 | View |
A-H | A-H | Q414 | Q101 | Q414 | Q101 | Hydrogen Bonds | Hydrogen Bonds | 0.89 | View |
A-H | A-H | K378 | Y99 | K378 | Y99 | Hydrophobic | Hydrophobic | 1.06 | View |
A-H | A-H | D427 | R94 | D427 | R94 | Attractive | Attractive | 1.12 | View |
A-H | A-H | K378 | Y99 | K378 | Y99 | Hydrophobic | Hydrophobic | 0.88 | View |
A-H | A-H | F429 | R97 | F429 | R97 | Hydrogen Bonds | Hydrogen Bonds | 1.37 | View |
A-H | A-H | K378 | Y99 | K378 | Y99 | Hydrophobic | Hydrophobic | 1.36 | View |
A-H | A-H | K378 | Y99 | K378 | Y99 | Hydrophobic | Hydrophobic | 1.25 | View |
A-H | A-H | D427 | T28 | D427 | T28 | Hydrogen Bonds | Hydrogen Bonds | 1.12 | View |
A-H | A-H | G413 | Y32 | G413 | Y32 | Hydrogen Bonds | Hydrogen Bonds | 1.34 | View |
A-H | A-H | F429 | R97 | F429 | R97 | Hydrogen Bonds | Hydrogen Bonds | 1.88 | View |
A-H | A-H | D427 | T28 | D427 | T28 | Hydrogen Bonds | Hydrogen Bonds | 1.02 | View |
A-H | A-H | D427 | Y32 | D427 | Y32 | Hydrophobic | Hydrophobic | 1.39 | View |
A-H | A-H | D428 | S31 | D427 | S31 | Hydrogen Bonds | Hydrogen Bonds | 1.17 | View |
A-H | A-H | D427 | Y32 | D427 | Y32 | Hydrogen Bonds | Hydrogen Bonds | 1.5 | View |
A-H | A-H | D427 | R97 | D427 | R97 | Hydrogen Bonds | Hydrogen Bonds | 1.59 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7LM8 | A-H | K378 | Y99 | Hydrophobic | 4.45 | View |
7LM8 | A-H | K378 | Y99 | Hydrophobic | 3.73 | View |
7LM8 | A-H | K378 | Y99 | Hydrophobic | 4.15 | View |
7LM8 | A-H | K378 | Y99 | Hydrophobic | 3.74 | View |
7LM8 | A-H | K378 | Y99 | Hydrophobic | 3.62 | View |
7LM8 | A-H | C379 | Y100 | Hydrogen Bonds | 2.89 | View |
7LM8 | A-H | C379 | Y100 | Hydrogen Bonds | 2.79 | View |
7LM8 | A-H | C379 | Y100 | Hydrophobic | 4.49 | View |
7LM8 | A-H | Y380 | R97 | Hydrophobic | 4.13 | View |
7LM8 | A-H | Y380 | R97 | Hydrophobic | 4.24 | View |
7LM8 | A-H | Y380 | Y99 | Hydrophobic | 4.48 | View |
7LM8 | A-H | Y380 | Y99 | Hydrophobic | 4.00 | View |
7LM8 | A-H | Y380 | Y99 | Hydrophobic | 3.78 | View |
7LM8 | A-H | D427 | S31 | Hydrogen Bonds | 3.53 | View |
7LM8_africa_mut | A-H | K378 | Y99 | Hydrophobic | 3.86 | View |
7LM8_africa_mut | A-H | K378 | Y99 | Hydrophobic | 3.48 | View |
7LM8_africa_mut | A-H | K378 | Y99 | Hydrophobic | 4.04 | View |
7LM8_africa_mut | A-H | K378 | Y99 | Hydrophobic | 4.22 | View |
7LM8_africa_mut | A-H | K378 | Y99 | Hydrophobic | 3.28 | View |
7LM8_africa_mut | A-H | K378 | Y100 | Hydrophobic | 3.89 | View |
7LM8_africa_mut | A-H | K378 | Y100 | Hydrophobic | 4.41 | View |
7LM8_africa_mut | A-H | K378 | Y100 | Hydrogen Bonds | 3.29 | View |
7LM8_africa_mut | A-H | C379 | Y100 | Hydrogen Bonds | 2.62 | View |
7LM8_africa_mut | A-H | C379 | Y100 | Hydrogen Bonds | 3.66 | View |
7LM8_africa_mut | A-H | Y380 | Y100 | Hydrophobic | 4.49 | View |
7LM8_africa_mut | A-H | Y380 | Y100 | Hydrophobic | 4.09 | View |
7LM8_africa_mut | A-H | Y380 | Y100 | Aromatic Stacking | 3.50 | View |
7LM8_africa_mut | A-H | Y380 | Y100 | Hydrophobic | 3.83 | View |
7LM8_africa_mut | A-H | Y380 | Y100 | Hydrophobic | 3.27 | View |
7LM8_africa_mut | A-H | Y380 | Y100 | Hydrophobic | 3.64 | View |
7LM8_africa_mut | A-H | Y380 | Y100 | Hydrophobic | 3.76 | View |
7LM8_africa_mut | A-H | Y380 | Y100 | Hydrophobic | 4.24 | View |
7LM8_africa_mut | A-H | Y380 | Y100 | Hydrophobic | 3.10 | View |
7LM8_africa_mut | A-H | Y380 | Y100 | Hydrophobic | 4.13 | View |
7LM8_africa_mut | A-H | Y380 | Y100 | Hydrophobic | 2.93 | View |
7LM8_africa_mut | A-H | Y380 | Y100 | Hydrophobic | 4.10 | View |
7LM8_africa_mut | A-H | Y380 | Y100 | Hydrophobic | 3.66 | View |
7LM8_africa_mut | A-H | Y380 | Y100 | Hydrophobic | 4.43 | View |
7LM8_africa_mut | A-H | Y380 | Y100 | Hydrophobic | 3.43 | View |
7LM8_africa_mut | A-H | Y380 | Y100 | Hydrophobic | 3.48 | View |
7LM8_africa_mut | A-H | Y380 | Y100 | Hydrophobic | 3.20 | View |
7LM8_africa_mut | A-H | Y380 | Y100 | Hydrophobic | 3.25 | View |
7LM8_africa_mut | A-H | Y380 | Y100 | Hydrophobic | 2.93 | View |
7LM8_africa_mut | A-H | Y380 | Y100 | Hydrogen Bonds | 3.13 | View |
7LM8_africa_mut | A-H | A411 | Y100 | Hydrophobic | 4.49 | View |
7LM8_africa_mut | A-H | A411 | Y100 | Hydrophobic | 3.93 | View |
7LM8_africa_mut | A-H | A411 | Y100 | Hydrophobic | 4.04 | View |
7LM8_africa_mut | A-H | G413 | H102 | Hydrogen Bonds | 2.61 | View |
7LM8_africa_mut | A-H | D427 | Y32 | Hydrogen Bonds | 3.82 | View |
7LM8_africa_mut | A-H | D428 | R97 | Hydrogen Bonds | 2.65 | View |
7LM8_africa_mut | A-H | T430 | R97 | Hydrogen Bonds | 3.23 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |