Execution time: 50.0 seconds
Match RMSD = 0.86
VTR = 0.09
Average AVD = 0.78 Å
Chains(7LJR.pdb ): A versus T
Chains(7LJR_africa_mut.pdb ) A versus T
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7LJR | 3378 | 3 | 0 | 10 | 0 | 0 | 0 | 13 |
B7LJR_africa_mut | 3369 | 17 | 0 | 13 | 0 | 0 | 1 | 31 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
A-T | A-T | E484 | S113 | K484 | S113 | Hydrogen Bonds | Hydrogen Bonds | 1.55 | View |
A-T | A-T | V483 | R115 | V483 | R115 | Hydrophobic | Hydrophobic | 0.53 | View |
A-T | A-T | F486 | S112 | F486 | S112 | Hydrogen Bonds | Hydrogen Bonds | 0.46 | View |
A-T | A-T | N487 | S50 | N487 | S50 | Hydrogen Bonds | Hydrogen Bonds | 1.15 | View |
A-T | A-T | P479 | S113 | P479 | S113 | Hydrogen Bonds | Hydrogen Bonds | 0.66 | View |
A-T | A-T | F486 | S113 | F486 | S113 | Hydrogen Bonds | Hydrogen Bonds | 0.62 | View |
A-T | A-T | V483 | R115 | V483 | R115 | Hydrophobic | Hydrophobic | 0.48 | View |
A-T | A-T | N481 | S113 | N481 | S113 | Hydrogen Bonds | Hydrogen Bonds | 0.54 | View |
A-T | A-T | E484 | S114 | K484 | S114 | Hydrogen Bonds | Hydrogen Bonds | 1.37 | View |
A-T | A-T | N487 | S50 | N487 | S50 | Hydrogen Bonds | Hydrogen Bonds | 0.84 | View |
A-T | A-T | C488 | S113 | C488 | S113 | Hydrogen Bonds | Hydrogen Bonds | 0.4 | View |
A-T | A-T | F486 | Y111 | F486 | Y111 | Hydrophobic | Hydrophobic | 0.72 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7LJR | A-T | E484 | S112 | Hydrogen Bonds | 3.79 | View |
7LJR_africa_mut | A-T | C480 | S113 | Hydrogen Bonds | 3.85 | View |
7LJR_africa_mut | A-T | K484 | Y111 | Hydrophobic | 3.76 | View |
7LJR_africa_mut | A-T | K484 | Y111 | Hydrophobic | 2.96 | View |
7LJR_africa_mut | A-T | K484 | Y111 | Hydrophobic | 3.51 | View |
7LJR_africa_mut | A-T | K484 | Y111 | Hydrogen Bonds | 3.05 | View |
7LJR_africa_mut | A-T | K484 | R115 | Hydrogen Bonds | 3.77 | View |
7LJR_africa_mut | A-T | F486 | Y111 | Hydrogen Bonds | 3.32 | View |
7LJR_africa_mut | A-T | F486 | Y111 | Hydrophobic | 2.83 | View |
7LJR_africa_mut | A-T | F486 | Y111 | Hydrophobic | 3.36 | View |
7LJR_africa_mut | A-T | F486 | Y111 | Hydrophobic | 2.86 | View |
7LJR_africa_mut | A-T | F486 | Y111 | Hydrophobic | 3.91 | View |
7LJR_africa_mut | A-T | F486 | Y111 | Hydrophobic | 3.42 | View |
7LJR_africa_mut | A-T | F486 | Y111 | Hydrophobic | 4.15 | View |
7LJR_africa_mut | A-T | F486 | Y111 | Aromatic Stacking | 4.99 | View |
7LJR_africa_mut | A-T | F486 | Y111 | Hydrophobic | 3.63 | View |
7LJR_africa_mut | A-T | F486 | Y111 | Hydrophobic | 3.77 | View |
7LJR_africa_mut | A-T | F486 | Y111 | Hydrophobic | 3.43 | View |
7LJR_africa_mut | A-T | F486 | Y111 | Hydrophobic | 3.32 | View |
7LJR_africa_mut | A-T | F486 | Y111 | Hydrophobic | 4.35 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |