Execution time: 42.0 seconds
Match RMSD = 0.66
VTR = 0.05
Average AVD = 0.58 Å
Chains(7LD1.pdb ): C versus M
Chains(7LD1_africa_mut.pdb ) C versus M
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7LD1 | 4251 | 22 | 0 | 10 | 0 | 0 | 2 | 34 |
B7LD1_africa_mut | 4248 | 42 | 1 | 15 | 0 | 0 | 2 | 60 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
C-M | C-M | F377 | Y128 | F377 | Y128 | Hydrophobic | Hydrophobic | 0.28 | View |
C-M | C-M | F377 | Y128 | F377 | Y128 | Hydrogen Bonds | Hydrogen Bonds | 0.29 | View |
C-M | C-M | F377 | Y128 | F377 | Y128 | Aromatic Stacking | Aromatic Stacking | 0.4 | View |
C-M | C-M | Y369 | Y128 | Y369 | Y128 | Hydrogen Bonds | Hydrogen Bonds | 0.41 | View |
C-M | C-M | R408 | L131 | R408 | L131 | Hydrophobic | Hydrophobic | 0.98 | View |
C-M | C-M | S371 | N76 | S371 | N76 | Hydrogen Bonds | Hydrogen Bonds | 0.31 | View |
C-M | C-M | T376 | L131 | T376 | L131 | Hydrophobic | Hydrophobic | 1.2 | View |
C-M | C-M | Y369 | Y128 | Y369 | Y128 | Hydrophobic | Hydrophobic | 0.46 | View |
C-M | C-M | F377 | Y128 | F377 | Y128 | Hydrophobic | Hydrophobic | 0.44 | View |
C-M | C-M | F374 | N76 | F374 | N76 | Hydrogen Bonds | Hydrogen Bonds | 0.24 | View |
C-M | C-M | V503 | Q81 | V503 | Q81 | Hydrophobic | Hydrophobic | 0.49 | View |
C-M | C-M | Y369 | Y128 | Y369 | Y128 | Aromatic Stacking | Aromatic Stacking | 0.35 | View |
C-M | C-M | F377 | Y128 | F377 | Y128 | Hydrophobic | Hydrophobic | 0.29 | View |
C-M | C-M | R408 | L131 | R408 | L131 | Hydrophobic | Hydrophobic | 0.99 | View |
C-M | C-M | Y369 | Y128 | Y369 | Y128 | Hydrophobic | Hydrophobic | 0.45 | View |
C-M | C-M | F377 | Y128 | F377 | Y128 | Hydrophobic | Hydrophobic | 0.46 | View |
C-M | C-M | C379 | S126 | C379 | S126 | Hydrogen Bonds | Hydrogen Bonds | 0.21 | View |
C-M | C-M | A411 | W125 | A411 | W125 | Hydrophobic | Hydrophobic | 0.72 | View |
C-M | C-M | V503 | I78 | V503 | I78 | Hydrophobic | Hydrophobic | 0.54 | View |
C-M | C-M | V503 | I78 | V503 | I78 | Hydrophobic | Hydrophobic | 1.01 | View |
C-M | C-M | Y369 | Y128 | Y369 | Y128 | Hydrophobic | Hydrophobic | 0.4 | View |
C-M | C-M | T376 | L130 | T376 | L131 | Hydrogen Bonds | Hydrogen Bonds | 1.19 | View |
C-M | C-M | K378 | W125 | K378 | W125 | Hydrophobic | Hydrophobic | 0.93 | View |
C-M | C-M | K378 | W125 | K378 | W125 | Hydrophobic | Hydrophobic | 0.76 | View |
C-M | C-M | F377 | Y128 | F377 | Y128 | Hydrogen Bonds | Hydrogen Bonds | 0.33 | View |
C-M | C-M | Y369 | Y128 | Y369 | Y128 | Hydrophobic | Hydrophobic | 0.55 | View |
C-M | C-M | Y369 | Y128 | Y369 | Y128 | Hydrophobic | Hydrophobic | 0.6 | View |
C-M | C-M | F377 | Y128 | F377 | Y128 | Hydrophobic | Hydrophobic | 0.45 | View |
C-M | C-M | C379 | S126 | C379 | S126 | Hydrogen Bonds | Hydrogen Bonds | 0.15 | View |
C-M | C-M | Y369 | Y128 | Y369 | Y128 | Hydrophobic | Hydrophobic | 0.56 | View |
C-M | C-M | A372 | N76 | A372 | N76 | Hydrogen Bonds | Hydrogen Bonds | 0.4 | View |
C-M | C-M | R408 | L131 | R408 | L131 | Hydrogen Bonds | Hydrogen Bonds | 1.42 | View |
C-M | C-M | V503 | I78 | V503 | I78 | Hydrophobic | Hydrophobic | 0.49 | View |
C-M | C-M | A411 | W125 | A411 | W125 | Hydrophobic | Hydrophobic | 0.89 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7LD1_africa_mut | C-M | Y369 | Y128 | Hydrophobic | 4.48 | View |
7LD1_africa_mut | C-M | Y369 | Y128 | Hydrogen Bonds | 3.46 | View |
7LD1_africa_mut | C-M | T376 | L131 | Hydrophobic | 4.36 | View |
7LD1_africa_mut | C-M | F377 | Y128 | Hydrophobic | 4.33 | View |
7LD1_africa_mut | C-M | K378 | D123 | Attractive, Hydrogen Bonds | 4.33 | View |
7LD1_africa_mut | C-M | K378 | W125 | Hydrophobic | 3.23 | View |
7LD1_africa_mut | C-M | K378 | W125 | Hydrophobic | 3.65 | View |
7LD1_africa_mut | C-M | K378 | W125 | Hydrophobic | 4.03 | View |
7LD1_africa_mut | C-M | K378 | W125 | Hydrophobic | 4.18 | View |
7LD1_africa_mut | C-M | K378 | W125 | Hydrophobic | 2.95 | View |
7LD1_africa_mut | C-M | K378 | W125 | Hydrophobic | 3.24 | View |
7LD1_africa_mut | C-M | K378 | W125 | Hydrophobic | 3.19 | View |
7LD1_africa_mut | C-M | K378 | W125 | Hydrophobic | 2.93 | View |
7LD1_africa_mut | C-M | K378 | W125 | Hydrophobic | 3.91 | View |
7LD1_africa_mut | C-M | S383 | S126 | Hydrogen Bonds | 3.27 | View |
7LD1_africa_mut | C-M | R408 | L131 | Hydrophobic | 4.42 | View |
7LD1_africa_mut | C-M | R408 | L131 | Hydrophobic | 4.26 | View |
7LD1_africa_mut | C-M | Y501 | Q81 | Hydrophobic | 4.12 | View |
7LD1_africa_mut | C-M | Y501 | Q81 | Hydrophobic | 4.05 | View |
7LD1_africa_mut | C-M | Y501 | Q81 | Hydrophobic | 3.76 | View |
7LD1_africa_mut | C-M | Y501 | Q81 | Hydrophobic | 3.60 | View |
7LD1_africa_mut | C-M | Y501 | Q81 | Hydrophobic | 4.47 | View |
7LD1_africa_mut | C-M | Y501 | Q81 | Hydrophobic | 3.27 | View |
7LD1_africa_mut | C-M | Y501 | Q81 | Hydrogen Bonds | 2.57 | View |
7LD1_africa_mut | C-M | Y501 | G82 | Hydrogen Bonds | 3.16 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |