Execution time: 48.0 seconds
Match RMSD = 0.77
VTR = 0.09
Average AVD = 0.67 Å
Chains(7LD1.pdb ): B versus H
Chains(7LD1_africa_mut.pdb ) B versus H
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7LD1 | 4251 | 7 | 0 | 11 | 0 | 0 | 0 | 18 |
B7LD1_africa_mut | 4248 | 39 | 2 | 15 | 0 | 0 | 2 | 58 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
B-H | B-H | F374 | N76 | F374 | N76 | Hydrogen Bonds | Hydrogen Bonds | 0.55 | View |
B-H | B-H | F377 | Y128 | F377 | Y128 | Hydrophobic | Hydrophobic | 1.07 | View |
B-H | B-H | F377 | Y128 | F377 | Y128 | Hydrophobic | Hydrophobic | 1.2 | View |
B-H | B-H | C379 | S126 | C379 | S126 | Hydrogen Bonds | Hydrogen Bonds | 0.32 | View |
B-H | B-H | K378 | W125 | K378 | W125 | Hydrophobic | Hydrophobic | 0.38 | View |
B-H | B-H | K378 | W125 | K378 | W125 | Hydrophobic | Hydrophobic | 0.38 | View |
B-H | B-H | C379 | S126 | C379 | S126 | Hydrogen Bonds | Hydrogen Bonds | 0.15 | View |
B-H | B-H | K378 | Y128 | K378 | Y128 | Hydrogen Bonds | Hydrogen Bonds | 0.55 | View |
B-H | B-H | N501 | Q81 | G502 | Q81 | Hydrogen Bonds | Hydrogen Bonds | 1.63 | View |
B-H | B-H | S375 | L131 | S375 | L131 | Hydrogen Bonds | Hydrogen Bonds | 0.64 | View |
B-H | B-H | V407 | L131 | V407 | L131 | Hydrophobic | Hydrophobic | 0.5 | View |
B-H | B-H | S375 | L130 | S375 | L130 | Hydrogen Bonds | Hydrogen Bonds | 0.63 | View |
B-H | B-H | Y369 | Y128 | Y369 | Y128 | Hydrogen Bonds | Hydrogen Bonds | 0.83 | View |
B-H | B-H | A435 | L131 | Y508 | L131 | Hydrophobic | Hydrophobic | 1.02 | View |
B-H | B-H | C379 | S126 | C379 | S126 | Hydrogen Bonds | Hydrogen Bonds | 0.29 | View |
B-H | B-H | F377 | Y128 | F377 | Y128 | Hydrogen Bonds | Hydrogen Bonds | 0.48 | View |
B-H | B-H | P499 | Q81 | P499 | Q81 | Hydrogen Bonds | Hydrogen Bonds | 0.52 | View |
B-H | B-H | F377 | Y128 | F377 | Y128 | Hydrophobic | Hydrophobic | 1.01 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7LD1_africa_mut | B-H | Y369 | Y128 | Aromatic Stacking | 4.98 | View |
7LD1_africa_mut | B-H | Y369 | Y128 | Hydrophobic | 3.73 | View |
7LD1_africa_mut | B-H | Y369 | Y128 | Hydrophobic | 4.14 | View |
7LD1_africa_mut | B-H | Y369 | Y128 | Hydrophobic | 4.41 | View |
7LD1_africa_mut | B-H | Y369 | Y128 | Hydrophobic | 3.23 | View |
7LD1_africa_mut | B-H | Y369 | Y128 | Hydrogen Bonds | 2.81 | View |
7LD1_africa_mut | B-H | F374 | Y128 | Aromatic Stacking | 5.94 | View |
7LD1_africa_mut | B-H | F374 | Y128 | Hydrophobic | 3.60 | View |
7LD1_africa_mut | B-H | F374 | Y128 | Hydrophobic | 4.07 | View |
7LD1_africa_mut | B-H | F374 | Y128 | Hydrophobic | 3.53 | View |
7LD1_africa_mut | B-H | F374 | Y128 | Hydrophobic | 4.12 | View |
7LD1_africa_mut | B-H | S375 | L131 | Hydrogen Bonds | 3.51 | View |
7LD1_africa_mut | B-H | T376 | Y128 | Hydrogen Bonds | 2.57 | View |
7LD1_africa_mut | B-H | T376 | D129 | Hydrogen Bonds | 3.49 | View |
7LD1_africa_mut | B-H | T376 | L131 | Hydrophobic | 4.21 | View |
7LD1_africa_mut | B-H | T376 | L131 | Hydrophobic | 3.49 | View |
7LD1_africa_mut | B-H | F377 | Y128 | Hydrophobic | 4.05 | View |
7LD1_africa_mut | B-H | F377 | Y128 | Hydrophobic | 4.12 | View |
7LD1_africa_mut | B-H | F377 | Y128 | Hydrophobic | 4.41 | View |
7LD1_africa_mut | B-H | F377 | Y128 | Hydrophobic | 4.29 | View |
7LD1_africa_mut | B-H | F377 | Y128 | Hydrophobic | 4.29 | View |
7LD1_africa_mut | B-H | K378 | D123 | Attractive | 5.17 | View |
7LD1_africa_mut | B-H | K378 | W125 | Hydrophobic | 3.08 | View |
7LD1_africa_mut | B-H | K378 | W125 | Hydrophobic | 3.15 | View |
7LD1_africa_mut | B-H | K378 | W125 | Hydrophobic | 3.85 | View |
7LD1_africa_mut | B-H | K378 | W125 | Hydrophobic | 4.48 | View |
7LD1_africa_mut | B-H | K378 | W125 | Hydrophobic | 3.41 | View |
7LD1_africa_mut | B-H | K378 | W125 | Hydrophobic | 3.29 | View |
7LD1_africa_mut | B-H | K378 | W125 | Hydrophobic | 3.40 | View |
7LD1_africa_mut | B-H | K378 | W125 | Hydrophobic | 3.64 | View |
7LD1_africa_mut | B-H | K378 | W125 | Hydrophobic | 4.49 | View |
7LD1_africa_mut | B-H | K378 | D129 | Attractive | 5.59 | View |
7LD1_africa_mut | B-H | V407 | L131 | Hydrophobic | 4.26 | View |
7LD1_africa_mut | B-H | V407 | L131 | Hydrophobic | 4.15 | View |
7LD1_africa_mut | B-H | V407 | L131 | Hydrophobic | 3.68 | View |
7LD1_africa_mut | B-H | V407 | L131 | Hydrophobic | 3.40 | View |
7LD1_africa_mut | B-H | A435 | L131 | Hydrophobic | 3.42 | View |
7LD1_africa_mut | B-H | V503 | I78 | Hydrophobic | 4.39 | View |
7LD1_africa_mut | B-H | V503 | Q81 | Hydrophobic | 3.71 | View |
7LD1_africa_mut | B-H | Y508 | L131 | Hydrophobic | 4.40 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |