Execution time: 45.0 seconds
Match RMSD = 0.59
VTR = 0.11
Average AVD = 0.57 Å
Chains(7LD1.pdb ): A versus O
Chains(7LD1_africa_mut.pdb ) A versus O
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7LD1 | 4251 | 3 | 0 | 3 | 0 | 0 | 0 | 6 |
B7LD1_africa_mut | 4248 | 10 | 4 | 13 | 0 | 0 | 0 | 27 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
A-O | A-O | Y505 | D20 | Y505 | D20 | Hydrophobic | Hydrophobic | 0.42 | View |
A-O | A-O | D405 | Y117 | D405 | Y117 | Hydrophobic | Hydrophobic | 0.41 | View |
A-O | A-O | K417 | S51 | N417 | S51 | Hydrogen Bonds | Hydrogen Bonds | 0.67 | View |
A-O | A-O | Q409 | Y50 | Q409 | Y50 | Hydrogen Bonds | Hydrogen Bonds | 0.71 | View |
A-O | A-O | D405 | Y50 | D405 | Y50 | Hydrogen Bonds | Hydrogen Bonds | 0.82 | View |
A-O | A-O | Y505 | P120 | Y505 | P120 | Hydrophobic | Hydrophobic | 0.37 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7LD1_africa_mut | A-O | R403 | D20 | Attractive | 5.92 | View |
7LD1_africa_mut | A-O | R403 | D20 | Attractive | 5.47 | View |
7LD1_africa_mut | A-O | R403 | D20 | Attractive, Hydrogen Bonds | 4.20 | View |
7LD1_africa_mut | A-O | R403 | D20 | Attractive | 5.93 | View |
7LD1_africa_mut | A-O | D405 | Y117 | Hydrogen Bonds | 2.57 | View |
7LD1_africa_mut | A-O | E406 | Y50 | Hydrogen Bonds | 3.88 | View |
7LD1_africa_mut | A-O | R408 | Y116 | Hydrogen Bonds | 3.54 | View |
7LD1_africa_mut | A-O | R408 | Y116 | Hydrogen Bonds | 3.23 | View |
7LD1_africa_mut | A-O | R408 | Y117 | Hydrogen Bonds | 3.05 | View |
7LD1_africa_mut | A-O | Q409 | Y50 | Hydrophobic | 4.47 | View |
7LD1_africa_mut | A-O | Q409 | Y50 | Hydrophobic | 4.01 | View |
7LD1_africa_mut | A-O | Q409 | Y50 | Hydrogen Bonds | 2.70 | View |
7LD1_africa_mut | A-O | Q409 | S51 | Hydrogen Bonds | 3.76 | View |
7LD1_africa_mut | A-O | T415 | S52 | Hydrogen Bonds | 3.39 | View |
7LD1_africa_mut | A-O | Y505 | D20 | Hydrophobic | 3.81 | View |
7LD1_africa_mut | A-O | Y505 | D20 | Hydrophobic | 3.67 | View |
7LD1_africa_mut | A-O | Y505 | D20 | Hydrophobic | 3.92 | View |
7LD1_africa_mut | A-O | Y505 | D20 | Hydrophobic | 3.71 | View |
7LD1_africa_mut | A-O | Y505 | D20 | Hydrophobic | 3.97 | View |
7LD1_africa_mut | A-O | Y505 | D20 | Hydrogen Bonds | 3.48 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |