VTR
28 main matches found
(34 matches in total )Execution time: 48.0 seconds
Match RMSD = 0.98
VTR = 0.11
Average AVD = 0.9 Å
Parameters
Chains(7LAB.pdb ): B versus Y
Chains(7LAB_africa_mut.pdb ) B versus Y
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
| Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
|---|---|---|---|---|---|---|---|---|
| A7LAB | 4194 | 12 | 15 | 23 | 0 | 8 | 1 | 59 |
| B7LAB_africa_mut | 4185 | 13 | 14 | 17 | 0 | 8 | 1 | 53 |
Matches
(Conservatives hydrophobic matches are hidden by default)
| Chains | Residues | Contact types | |||||||
|---|---|---|---|---|---|---|---|---|---|
| A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
| Y-B | Y-B | P121 | H66 | P121 | H66 | Hydrogen Bonds | Hydrogen Bonds | 0.63 | View |
| Y-B | Y-B | Y131 | F32 | Y131 | F32 | Hydrophobic | Hydrophobic | 0.45 | View |
| Y-B | Y-B | H54 | R214 | H54 | R214 | Repulsive | Repulsive | 0.63 | View |
| Y-B | Y-B | D74 | K97 | D74 | K97 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 1.31 | View |
| Y-B | Y-B | S119 | R214 | S119 | R214 | Hydrogen Bonds | Hydrogen Bonds | 1.24 | View |
| Y-B | Y-B | D71 | K97 | D71 | K97 | Attractive | Attractive | 1.01 | View |
| Y-B | Y-B | S118 | R214 | S118 | R214 | Hydrogen Bonds | Hydrogen Bonds | 0.69 | View |
| Y-B | Y-B | H132 | R214 | H132 | R214 | Repulsive | Repulsive | 0.86 | View |
| Y-B | Y-B | Y131 | N30 | Y131 | N30 | Hydrophobic | Hydrophobic | 0.48 | View |
| Y-B | Y-B | S119 | R214 | S119 | R214 | Hydrogen Bonds | Hydrogen Bonds | 1.04 | View |
| Y-B | Y-B | Y131 | F32 | Y131 | F32 | Hydrophobic | Hydrophobic | 0.55 | View |
| Y-B | Y-B | D50 | H66 | D50 | H66 | Attractive | Attractive | 0.85 | View |
| Y-B | Y-B | D74 | K97 | D74 | K97 | Attractive | Attractive | 1.22 | View |
| Y-B | Y-B | D50 | H69 | D50 | H69 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 1.83 | View |
| Y-B | Y-B | H132 | R214 | H132 | R214 | Repulsive | Repulsive | 0.84 | View |
| Y-B | Y-B | P121 | R214 | P121 | R214 | Hydrophobic | Hydrophobic | 0.99 | View |
| Y-B | Y-B | S118 | R214 | S118 | R214 | Hydrogen Bonds | Hydrogen Bonds | 0.87 | View |
| Y-B | Y-B | Y131 | F32 | Y131 | F32 | Hydrophobic | Hydrophobic | 0.53 | View |
| Y-B | Y-B | S129 | T29 | S129 | T29 | Hydrogen Bonds | Hydrogen Bonds | 0.51 | View |
| Y-B | Y-B | E73 | K97 | E73 | K97 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 1.19 | View |
| Y-B | Y-B | S129 | Y28 | S129 | Y28 | Hydrogen Bonds | Hydrogen Bonds | 0.4 | View |
| Y-B | Y-B | H132 | R214 | H132 | R214 | Repulsive | Repulsive | 0.82 | View |
| Y-B | Y-B | E73 | K97 | E73 | K97 | Attractive | Attractive | 1.48 | View |
| Y-B | Y-B | H54 | R214 | H54 | R214 | Repulsive | Repulsive | 0.62 | View |
| Y-B | Y-B | Y131 | N30 | Y131 | N30 | Hydrogen Bonds | Hydrogen Bonds | 0.77 | View |
| Y-B | Y-B | Y131 | F32 | Y131 | F32 | Aromatic Stacking | Aromatic Stacking | 0.4 | View |
| Y-B | Y-B | H54 | R214 | H54 | R214 | Repulsive | Repulsive | 0.65 | View |
| Y-B | Y-B | Y131 | F32 | Y131 | F32 | Hydrophobic | Hydrophobic | 0.63 | View |
| Y-B | Y-B | H132 | R214 | H132 | R214 | Repulsive | Repulsive | 0.54 | View |
| Y-B | Y-B | H132 | R214 | H132 | R214 | Repulsive | Repulsive | 1.02 | View |
| Y-B | Y-B | D50 | H66 | D50 | H66 | Attractive | Attractive | 0.74 | View |
| Y-B | Y-B | C130 | R214 | C130 | R214 | Hydrogen Bonds | Hydrogen Bonds | 1.27 | View |
| Y-B | Y-B | T49 | H69 | T49 | I68 | Hydrogen Bonds | Hydrophobic | 1.74 | View |
| Y-B | Y-B | D50 | H69 | D50 | H69 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 1.73 | View |