VTR
2 main matches found
(11 matches in total )Execution time: 25.0 seconds
Match RMSD = 0.85
VTR = 0.05
Average AVD = 0.77 Å
Parameters
Chains(7L56.pdb ): C versus F
Chains(7L56_africa_mut.pdb ) C versus F
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
| Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
|---|---|---|---|---|---|---|---|---|
| A7L56 | 3623 | 10 | 0 | 7 | 0 | 0 | 0 | 17 |
| B7L56_africa_mut | 3620 | 11 | 0 | 3 | 0 | 0 | 0 | 14 |
Matches
(Conservatives hydrophobic matches are hidden by default)
| Chains | Residues | Contact types | |||||||
|---|---|---|---|---|---|---|---|---|---|
| A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
| C-F | C-F | Y449 | T30 | Y449 | T30 | Hydrophobic | Hydrophobic | 0.52 | View |
| C-F | C-F | S494 | T30 | S494 | T30 | Hydrogen Bonds | Hydrogen Bonds | 0.35 | View |
| C-F | C-F | Y449 | T30 | Y449 | T30 | Hydrophobic | Hydrophobic | 0.48 | View |
| C-F | C-F | Y449 | F29 | Y449 | F29 | Hydrophobic | Hydrophobic | 0.72 | View |
| C-F | C-F | E484 | W50 | K484 | W50 | Hydrophobic | Hydrophobic | 0.87 | View |
| C-F | C-F | E484 | W50 | K484 | W50 | Hydrophobic | Hydrophobic | 0.92 | View |
| C-F | C-F | E484 | Y33 | K484 | Y33 | Hydrophobic | Hydrophobic | 1.81 | View |
| C-F | C-F | Y449 | F29 | Y449 | F29 | Hydrogen Bonds | Hydrogen Bonds | 0.75 | View |
| C-F | C-F | Y449 | T30 | Y449 | T30 | Hydrophobic | Hydrophobic | 0.58 | View |
| C-F | C-F | Y449 | F29 | Y449 | F29 | Hydrophobic | Hydrophobic | 0.79 | View |
| C-F | C-F | Y449 | T30 | Y449 | T30 | Hydrophobic | Hydrophobic | 0.61 | View |