Execution time: 28.0 seconds
Match RMSD = 0.84
VTR = 0.08
Average AVD = 0.73 Å
Chains(7L2E.pdb ): C versus I
Chains(7L2E_africa_mut.pdb ) C versus I
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7L2E | 4011 | 19 | 0 | 16 | 0 | 0 | 0 | 35 |
B7L2E_africa_mut | 4002 | 15 | 0 | 18 | 0 | 0 | 0 | 33 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
C-I | C-I | Y248 | N56 | Y248 | N56 | Hydrophobic | Hydrophobic | 0.34 | View |
C-I | C-I | S247 | Y98 | S247 | Y98 | Hydrogen Bonds | Hydrogen Bonds | 1.83 | View |
C-I | C-I | L249 | V50 | L249 | V50 | Hydrophobic | Hydrophobic | 0.32 | View |
C-I | C-I | N17 | N56 | N17 | N56 | Hydrogen Bonds | Hydrogen Bonds | 0.29 | View |
C-I | C-I | L249 | G33 | L249 | G33 | Hydrogen Bonds | Hydrogen Bonds | 0.67 | View |
C-I | C-I | L249 | V50 | L249 | V50 | Hydrophobic | Hydrophobic | 0.48 | View |
C-I | C-I | T250 | Y32 | T250 | Y32 | Hydrophobic | Hydrophobic | 0.86 | View |
C-I | C-I | Y248 | N56 | Y248 | N56 | Hydrophobic | Hydrophobic | 0.32 | View |
C-I | C-I | T250 | Y32 | T250 | Y32 | Hydrophobic | Hydrophobic | 1.09 | View |
C-I | C-I | T250 | D95 | T250 | D95 | Hydrogen Bonds | Hydrogen Bonds | 0.97 | View |
C-I | C-I | T250 | D95 | T250 | S96 | Hydrogen Bonds | Hydrogen Bonds | 1.07 | View |
C-I | C-I | T250 | G33 | T250 | G33 | Hydrogen Bonds | Hydrogen Bonds | 0.6 | View |
C-I | C-I | T250 | Y32 | T250 | Y32 | Hydrophobic | Hydrophobic | 1.02 | View |
C-I | C-I | N17 | S55 | N17 | S55 | Hydrogen Bonds | Hydrogen Bonds | 0.66 | View |
C-I | C-I | Y248 | S52 | Y248 | S52 | Hydrogen Bonds | Hydrogen Bonds | 0.54 | View |
C-I | C-I | N17 | S55 | N17 | S55 | Hydrogen Bonds | Hydrogen Bonds | 0.6 | View |
C-I | C-I | N17 | N56 | N17 | N56 | Hydrogen Bonds | Hydrogen Bonds | 0.31 | View |
C-I | C-I | Y248 | H58 | Y248 | H58 | Hydrogen Bonds | Hydrogen Bonds | 0.84 | View |
C-I | C-I | T250 | Y98 | T250 | Y98 | Hydrophobic | Hydrophobic | 1.45 | View |
C-I | C-I | L249 | V50 | L249 | V50 | Hydrophobic | Hydrophobic | 0.43 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7L2E | C-I | Y144 | Y100 | Hydrophobic | 4.42 | View |
7L2E | C-I | Y144 | Y100 | Hydrophobic | 3.83 | View |
7L2E | C-I | Y144 | Y100 | Hydrophobic | 4.08 | View |
7L2E | C-I | E156 | Y100 | Hydrophobic | 3.99 | View |
7L2E | C-I | E156 | Y100 | Hydrogen Bonds | 2.61 | View |
7L2E | C-I | R158 | Y100 | Hydrogen Bonds | 2.67 | View |
7L2E | C-I | R158 | Y100 | Hydrogen Bonds | 3.07 | View |
7L2E | C-I | L244 | Y100 | Hydrophobic | 4.28 | View |
7L2E | C-I | H245 | Y100 | Hydrogen Bonds | 3.30 | View |
7L2E | C-I | R246 | Y100 | Hydrogen Bonds | 3.84 | View |
7L2E | C-I | Y248 | Y100 | Hydrophobic | 4.16 | View |
7L2E | C-I | Y248 | Y100 | Hydrophobic | 3.95 | View |
7L2E | C-I | Y248 | Y100 | Hydrophobic | 4.03 | View |
7L2E | C-I | Y248 | Y100 | Hydrophobic | 3.47 | View |
7L2E | C-I | T250 | Y98 | Hydrophobic | 3.63 | View |
7L2E_africa_mut | C-I | V16 | N56 | Hydrophobic | 4.14 | View |
7L2E_africa_mut | C-I | E156 | Y100 | Hydrogen Bonds | 3.33 | View |
7L2E_africa_mut | C-I | R158 | Y100 | Hydrogen Bonds | 3.83 | View |
7L2E_africa_mut | C-I | I246 | Y100 | Hydrophobic | 4.32 | View |
7L2E_africa_mut | C-I | Y248 | Y100 | Hydrophobic | 4.14 | View |
7L2E_africa_mut | C-I | Y248 | Y100 | Hydrogen Bonds | 3.71 | View |
7L2E_africa_mut | C-I | L249 | N56 | Hydrophobic | 4.42 | View |
7L2E_africa_mut | C-I | L249 | Y100 | Hydrophobic | 4.42 | View |
7L2E_africa_mut | C-I | T250 | Y32 | Hydrophobic | 4.42 | View |
7L2E_africa_mut | C-I | T250 | D95 | Hydrogen Bonds | 3.56 | View |
7L2E_africa_mut | C-I | T250 | D95 | Hydrogen Bonds | 2.92 | View |
7L2E_africa_mut | C-I | T250 | G97 | Hydrogen Bonds | 3.60 | View |
7L2E_africa_mut | C-I | D253 | Y98 | Hydrogen Bonds | 3.62 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |