Execution time: 32.0 seconds
Match RMSD = 0.77
VTR = 0.08
Average AVD = 0.65 Å
Chains(7L2E.pdb ): A versus H
Chains(7L2E_africa_mut.pdb ) A versus H
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7L2E | 4011 | 18 | 0 | 16 | 0 | 0 | 1 | 35 |
B7L2E_africa_mut | 4002 | 16 | 0 | 18 | 0 | 0 | 0 | 34 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
A-H | A-H | L249 | V50 | L249 | V50 | Hydrophobic | Hydrophobic | 0.27 | View |
A-H | A-H | N17 | S55 | N17 | S55 | Hydrogen Bonds | Hydrogen Bonds | 0.69 | View |
A-H | A-H | Y248 | H58 | Y248 | H58 | Hydrogen Bonds | Hydrogen Bonds | 0.8 | View |
A-H | A-H | N17 | S55 | N17 | S55 | Hydrogen Bonds | Hydrogen Bonds | 0.56 | View |
A-H | A-H | N17 | N56 | N17 | N56 | Hydrogen Bonds | Hydrogen Bonds | 0.29 | View |
A-H | A-H | L249 | V50 | L249 | V50 | Hydrophobic | Hydrophobic | 0.4 | View |
A-H | A-H | T250 | G33 | T250 | G33 | Hydrogen Bonds | Hydrogen Bonds | 0.57 | View |
A-H | A-H | P251 | S31 | P251 | S31 | Hydrogen Bonds | Hydrogen Bonds | 0.29 | View |
A-H | A-H | Y248 | N56 | Y248 | N56 | Hydrophobic | Hydrophobic | 0.31 | View |
A-H | A-H | T250 | Y32 | T250 | Y32 | Hydrophobic | Hydrophobic | 0.98 | View |
A-H | A-H | T250 | Y98 | T250 | Y98 | Hydrophobic | Hydrophobic | 1.38 | View |
A-H | A-H | L249 | V50 | L249 | V50 | Hydrophobic | Hydrophobic | 0.38 | View |
A-H | A-H | N17 | N56 | N17 | N56 | Hydrogen Bonds | Hydrogen Bonds | 0.3 | View |
A-H | A-H | L249 | G33 | L249 | G33 | Hydrogen Bonds | Hydrogen Bonds | 0.59 | View |
A-H | A-H | Y248 | S52 | Y248 | S52 | Hydrogen Bonds | Hydrogen Bonds | 0.49 | View |
A-H | A-H | S247 | Y98 | S247 | Y98 | Hydrogen Bonds | Hydrogen Bonds | 1.8 | View |
A-H | A-H | Y248 | N56 | Y248 | N56 | Hydrophobic | Hydrophobic | 0.29 | View |
A-H | A-H | T250 | D95 | T250 | D95 | Hydrogen Bonds | Hydrogen Bonds | 0.89 | View |
A-H | A-H | T250 | Y32 | T250 | Y32 | Hydrophobic | Hydrophobic | 1.04 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7L2E | A-H | Y144 | Y100 | Hydrophobic | 4.42 | View |
7L2E | A-H | Y144 | Y100 | Hydrophobic | 3.83 | View |
7L2E | A-H | Y144 | Y100 | Hydrophobic | 4.08 | View |
7L2E | A-H | E156 | Y100 | Hydrophobic | 3.99 | View |
7L2E | A-H | E156 | Y100 | Hydrogen Bonds | 2.61 | View |
7L2E | A-H | R158 | Y100 | Hydrogen Bonds | 2.67 | View |
7L2E | A-H | R158 | Y100 | Hydrogen Bonds | 3.07 | View |
7L2E | A-H | L244 | Y100 | Hydrophobic | 4.28 | View |
7L2E | A-H | H245 | Y100 | Hydrogen Bonds | 3.30 | View |
7L2E | A-H | R246 | Y100 | Hydrogen Bonds | 3.80 | View |
7L2E | A-H | Y248 | Y100 | Aromatic Stacking | 5.92 | View |
7L2E | A-H | Y248 | Y100 | Hydrophobic | 4.11 | View |
7L2E | A-H | Y248 | Y100 | Hydrophobic | 3.83 | View |
7L2E | A-H | Y248 | Y100 | Hydrophobic | 4.01 | View |
7L2E | A-H | Y248 | Y100 | Hydrophobic | 3.39 | View |
7L2E | A-H | T250 | Y98 | Hydrophobic | 3.81 | View |
7L2E_africa_mut | A-H | V16 | N56 | Hydrophobic | 4.13 | View |
7L2E_africa_mut | A-H | E156 | Y100 | Hydrogen Bonds | 3.35 | View |
7L2E_africa_mut | A-H | R158 | Y100 | Hydrogen Bonds | 3.82 | View |
7L2E_africa_mut | A-H | I246 | Y100 | Hydrophobic | 4.44 | View |
7L2E_africa_mut | A-H | Y248 | Y100 | Hydrophobic | 4.12 | View |
7L2E_africa_mut | A-H | Y248 | Y100 | Hydrogen Bonds | 3.61 | View |
7L2E_africa_mut | A-H | L249 | S52 | Hydrogen Bonds | 3.81 | View |
7L2E_africa_mut | A-H | L249 | N56 | Hydrophobic | 4.21 | View |
7L2E_africa_mut | A-H | L249 | Y100 | Hydrophobic | 4.36 | View |
7L2E_africa_mut | A-H | L249 | Y100 | Hydrophobic | 4.42 | View |
7L2E_africa_mut | A-H | T250 | Y32 | Hydrophobic | 4.32 | View |
7L2E_africa_mut | A-H | T250 | Y32 | Hydrophobic | 4.14 | View |
7L2E_africa_mut | A-H | T250 | D95 | Hydrogen Bonds | 3.64 | View |
7L2E_africa_mut | A-H | T250 | D95 | Hydrogen Bonds | 3.18 | View |
7L2E_africa_mut | A-H | D253 | Y98 | Hydrogen Bonds | 3.51 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |