Execution time: 15.0 seconds
Match RMSD = 1.2
VTR = 0.09
Average AVD = 1.13 Å
Chains(7L2C.pdb ): A versus H
Chains(7L2C_africa_mut.pdb ) A versus H
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7L2C | 1404 | 38 | 14 | 20 | 0 | 0 | 3 | 75 |
B7L2C_africa_mut | 1398 | 41 | 8 | 20 | 0 | 0 | 3 | 72 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
A-H | A-H | K147 | E71 | K147 | E71 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 0.89 | View |
A-H | A-H | Y248 | W96 | Y248 | W96 | Hydrophobic | Hydrophobic | 0.85 | View |
A-H | A-H | K147 | F51 | K147 | F51 | Hydrophobic | Hydrophobic | 0.43 | View |
A-H | A-H | K147 | F51 | K147 | F51 | Hydrophobic | Hydrophobic | 0.59 | View |
A-H | A-H | Y144 | E31 | Y144 | E31 | Hydrophobic | Hydrophobic | 0.48 | View |
A-H | A-H | Y144 | E31 | Y144 | E31 | Hydrophobic | Hydrophobic | 0.37 | View |
A-H | A-H | Y248 | Y98 | Y248 | Y98 | Hydrophobic | Hydrophobic | 1.87 | View |
A-H | A-H | K150 | E53 | K150 | E53 | Attractive | Attractive Hydrogen Bonds | 1.27 | View |
A-H | A-H | K147 | I30 | K147 | I30 | Hydrogen Bonds | Hydrogen Bonds | 0.58 | View |
A-H | A-H | Y248 | W96 | Y248 | W96 | Hydrophobic | Hydrophobic | 1.69 | View |
A-H | A-H | K147 | L32 | K147 | L32 | Hydrogen Bonds | Hydrogen Bonds | 1.16 | View |
A-H | A-H | Y248 | Y27 | Y248 | Y27 | Aromatic Stacking | Aromatic Stacking | 1.08 | View |
A-H | A-H | Y248 | E31 | Y248 | E31 | Hydrophobic | Hydrophobic | 0.77 | View |
A-H | A-H | Y248 | Y98 | Y248 | Y98 | Hydrophobic | Hydrophobic | 1.59 | View |
A-H | A-H | Y248 | E31 | Y248 | E31 | Hydrophobic | Hydrophobic | 0.67 | View |
A-H | A-H | K147 | F51 | K147 | F51 | Hydrophobic | Hydrophobic | 0.51 | View |
A-H | A-H | T250 | Y102 | G252 | Y102 | Hydrogen Bonds | Hydrogen Bonds | 1.15 | View |
A-H | A-H | P251 | Y102 | P251 | Y102 | Hydrophobic | Hydrophobic | 1.86 | View |
A-H | A-H | Y248 | Y98 | Y248 | Y98 | Hydrophobic | Hydrophobic | 1.57 | View |
A-H | A-H | Y248 | Y98 | Y248 | Y98 | Hydrophobic | Hydrophobic | 1.62 | View |
A-H | A-H | Y248 | W96 | Y248 | W96 | Aromatic Stacking | Aromatic Stacking | 1.29 | View |
A-H | A-H | T250 | Q1 | T250 | Q1 | Hydrogen Bonds | Hydrogen Bonds | 1.12 | View |
A-H | A-H | Y248 | Y27 | Y248 | Y27 | Hydrophobic | Hydrophobic | 0.89 | View |
A-H | A-H | Y248 | Y27 | Y248 | Y27 | Hydrophobic | Hydrophobic | 1.11 | View |
A-H | A-H | P251 | Y102 | P251 | Y102 | Hydrophobic | Hydrophobic | 1.14 | View |
A-H | A-H | K150 | D54 | K150 | D54 | Attractive | Attractive | 1.33 | View |
A-H | A-H | Y248 | W96 | Y248 | W96 | Hydrophobic | Hydrophobic | 1.37 | View |
A-H | A-H | K147 | E71 | K147 | E71 | Attractive Hydrogen Bonds | Attractive Hydrogen Bonds | 0.85 | View |
A-H | A-H | Y248 | W96 | Y248 | W96 | Hydrophobic | Hydrophobic | 1.32 | View |
A-H | A-H | P251 | Q1 | P251 | Q1 | Hydrogen Bonds | Hydrogen Bonds | 1.17 | View |
A-H | A-H | Y248 | E31 | Y248 | E31 | Hydrogen Bonds | Hydrogen Bonds | 0.59 | View |
A-H | A-H | L249 | Y102 | T250 | Y102 | Hydrogen Bonds | Hydrogen Bonds | 1.39 | View |
A-H | A-H | Y248 | W96 | Y248 | W96 | Hydrophobic | Hydrophobic | 1.78 | View |
A-H | A-H | K147 | L29 | K147 | L29 | Hydrogen Bonds | Hydrogen Bonds | 0.9 | View |
A-H | A-H | R158 | E31 | R158 | E31 | Attractive | Attractive | 0.47 | View |
A-H | A-H | Y248 | W96 | Y248 | W96 | Hydrophobic | Hydrophobic | 1.87 | View |
A-H | A-H | Y145 | A97 | Y145 | A97 | Hydrophobic | Hydrophobic | 0.93 | View |
A-H | A-H | Y248 | W96 | Y248 | W96 | Hydrophobic | Hydrophobic | 1.25 | View |
A-H | A-H | Y248 | Y98 | Y248 | Y98 | Hydrophobic | Hydrophobic | 1.44 | View |
A-H | A-H | L249 | Y27 | L249 | Y27 | Hydrogen Bonds | Hydrogen Bonds | 1.53 | View |
A-H | A-H | Y145 | A97 | Y145 | A97 | Hydrophobic | Hydrophobic | 0.93 | View |
A-H | A-H | L249 | W96 | T250 | W96 | Hydrogen Bonds | Hydrogen Bonds | 1.47 | View |
A-H | A-H | Y248 | Y98 | Y248 | Y98 | Aromatic Stacking | Aromatic Stacking | 1.24 | View |
A-H | A-H | H146 | I30 | H146 | I30 | Hydrophobic | Hydrophobic | 0.45 | View |
A-H | A-H | Y248 | Y98 | Y248 | Y98 | Hydrophobic | Hydrophobic | 1.3 | View |
A-H | A-H | Y248 | W96 | Y248 | W96 | Hydrophobic | Hydrophobic | 1.08 | View |
A-H | A-H | Y248 | Y98 | Y248 | Y98 | Hydrophobic | Hydrophobic | 1.1 | View |
A-H | A-H | Y248 | W96 | Y248 | W96 | Hydrophobic | Hydrophobic | 0.85 | View |
A-H | A-H | Y248 | Y27 | Y248 | Y27 | Hydrophobic | Hydrophobic | 0.99 | View |
A-H | A-H | Y248 | Y27 | Y248 | Y27 | Hydrophobic | Hydrophobic | 1.22 | View |
A-H | A-H | Y248 | W96 | Y248 | W96 | Hydrophobic | Hydrophobic | 1.5 | View |
A-H | A-H | Y248 | W96 | Y248 | W96 | Hydrophobic | Hydrophobic | 1.03 | View |
A-H | A-H | Y248 | Y98 | L249 | Y98 | Hydrogen Bonds | Hydrogen Bonds | 1.92 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7L2C | A-H | K150 | E53 | Hydrogen Bonds | 3.20 | View |
7L2C | A-H | K150 | E53 | Attractive, Hydrogen Bonds | 3.14 | View |
7L2C | A-H | R246 | G26 | Hydrogen Bonds | 3.08 | View |
7L2C | A-H | R246 | Y27 | Hydrophobic | 4.16 | View |
7L2C | A-H | R246 | E31 | Attractive, Hydrogen Bonds | 3.83 | View |
7L2C | A-H | R246 | E31 | Attractive, Hydrogen Bonds | 3.16 | View |
7L2C | A-H | R246 | E31 | Attractive | 4.26 | View |
7L2C | A-H | R246 | E31 | Attractive | 4.20 | View |
7L2C | A-H | R246 | E31 | Attractive | 5.58 | View |
7L2C | A-H | R246 | E31 | Attractive | 5.41 | View |
7L2C | A-H | R246 | E31 | Attractive, Hydrogen Bonds | 3.72 | View |
7L2C | A-H | R246 | E31 | Attractive | 4.35 | View |
7L2C | A-H | S247 | Y27 | Hydrogen Bonds | 2.70 | View |
7L2C | A-H | Y248 | W96 | Hydrophobic | 4.33 | View |
7L2C | A-H | Y248 | W96 | Hydrophobic | 4.01 | View |
7L2C | A-H | Y248 | Y98 | Hydrophobic | 4.19 | View |
7L2C_africa_mut | A-H | Y144 | I30 | Hydrophobic | 4.33 | View |
7L2C_africa_mut | A-H | K147 | A97 | Hydrophobic | 4.47 | View |
7L2C_africa_mut | A-H | K150 | E53 | Attractive, Hydrogen Bonds | 4.80 | View |
7L2C_africa_mut | A-H | K150 | D54 | Attractive, Hydrogen Bonds | 4.35 | View |
7L2C_africa_mut | A-H | R158 | E31 | Attractive | 5.85 | View |
7L2C_africa_mut | A-H | Y248 | W96 | Hydrophobic | 3.63 | View |
7L2C_africa_mut | A-H | Y248 | W96 | Hydrophobic | 4.34 | View |
7L2C_africa_mut | A-H | Y248 | W96 | Hydrophobic | 4.00 | View |
7L2C_africa_mut | A-H | Y248 | Y98 | Hydrophobic | 4.40 | View |
7L2C_africa_mut | A-H | Y248 | Y98 | Hydrophobic | 4.36 | View |
7L2C_africa_mut | A-H | L249 | W96 | Hydrogen Bonds | 2.59 | View |
7L2C_africa_mut | A-H | G252 | Q1 | Hydrogen Bonds | 3.12 | View |
7L2C_africa_mut | A-H | D253 | Q1 | Hydrogen Bonds | 3.71 | View |
7L2C_africa_mut | A-H | S254 | Q1 | Hydrogen Bonds | 3.76 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |