Execution time: 13.0 seconds
Match RMSD = 0.54
VTR = 0.01
Average AVD = 0.48 Å
Chains(7L0N.pdb ): R versus H
Chains(7L0N_africa_mut.pdb ) R versus H
Cutoff: 2 Å
Detection of structural contacts in α-helices OFF
Contacts found | Number of residues | Hydrophobic | Attractive | Hydrogen Bonds | Disulphide Bonds | Repulsive | Aromatic Stacking | Total |
---|---|---|---|---|---|---|---|---|
A7L0N | 3304 | 26 | 3 | 7 | 0 | 0 | 0 | 36 |
B7L0N_africa_mut | 3304 | 30 | 3 | 8 | 0 | 0 | 1 | 42 |
(Conservatives hydrophobic matches are hidden by default)
Chains | Residues | Contact types | |||||||
---|---|---|---|---|---|---|---|---|---|
A | B | A1 | A2 | B1 | B2 | A [1-2] | B [1-2] | AVD | Contact |
H-R | H-R | Y58 | F377 | Y58 | F377 | Hydrophobic | Hydrophobic | 1.1 | View |
H-R | H-R | Y103 | L390 | Y103 | L390 | Hydrophobic | Hydrophobic | 0.43 | View |
H-R | H-R | Y103 | L390 | Y103 | L390 | Hydrophobic | Hydrophobic | 0.31 | View |
H-R | H-R | Y58 | T385 | Y58 | T385 | Hydrophobic | Hydrophobic | 0.32 | View |
H-R | H-R | D56 | Y369 | D56 | Y369 | Hydrophobic | Hydrophobic | 0.19 | View |
H-R | H-R | D56 | Y369 | D56 | Y369 | Hydrophobic | Hydrophobic | 0.38 | View |
H-R | H-R | D33 | T385 | D33 | T385 | Hydrogen Bonds | Hydrogen Bonds | 0.55 | View |
H-R | H-R | Y58 | P384 | Y58 | P384 | Hydrogen Bonds | Hydrogen Bonds | 0.34 | View |
H-R | H-R | Y103 | L390 | Y103 | L390 | Hydrophobic | Hydrophobic | 0.61 | View |
H-R | H-R | D33 | K386 | D33 | K386 | Attractive | Attractive | 0.89 | View |
H-R | H-R | D33 | K386 | D33 | K386 | Attractive | Attractive | 0.9 | View |
H-R | H-R | Y58 | P384 | Y58 | P384 | Hydrophobic | Hydrophobic | 0.34 | View |
H-R | H-R | Y58 | P384 | Y58 | P384 | Hydrophobic | Hydrophobic | 0.3 | View |
H-R | H-R | T57 | N370 | T57 | N370 | Hydrogen Bonds | Hydrogen Bonds | 0.29 | View |
H-R | H-R | Y103 | L517 | Y103 | L517 | Hydrophobic | Hydrophobic | 0.53 | View |
H-R | H-R | T57 | N370 | T57 | N370 | Hydrogen Bonds | Hydrogen Bonds | 0.26 | View |
H-R | H-R | D56 | Y369 | D56 | Y369 | Hydrophobic | Hydrophobic | 0.47 | View |
H-R | H-R | Y58 | P384 | Y58 | P384 | Hydrophobic | Hydrophobic | 0.32 | View |
H-R | H-R | D56 | Y369 | D56 | Y369 | Hydrophobic | Hydrophobic | 0.52 | View |
H-R | H-R | T50 | T385 | T50 | T385 | Hydrophobic | Hydrophobic | 0.41 | View |
H-R | H-R | Y103 | L390 | Y103 | L390 | Hydrophobic | Hydrophobic | 0.62 | View |
H-R | H-R | D56 | Y369 | D56 | Y369 | Hydrophobic | Hydrophobic | 0.34 | View |
H-R | H-R | D99 | K386 | D99 | K386 | Attractive | Attractive | 0.77 | View |
H-R | H-R | A54 | Y369 | A54 | Y369 | Hydrophobic | Hydrophobic | 0.99 | View |
H-R | H-R | Y103 | V382 | Y103 | V382 | Hydrophobic | Hydrophobic | 0.34 | View |
H-R | H-R | Y58 | T385 | Y58 | T385 | Hydrophobic | Hydrophobic | 0.29 | View |
H-R | H-R | Y58 | T385 | Y58 | T385 | Hydrogen Bonds | Hydrogen Bonds | 0.24 | View |
H-R | H-R | D33 | T385 | D33 | T385 | Hydrogen Bonds | Hydrogen Bonds | 0.55 | View |
H-R | H-R | G55 | N370 | G55 | N370 | Hydrogen Bonds | Hydrogen Bonds | 0.31 | View |
H-R | H-R | Y103 | V382 | Y103 | V382 | Hydrophobic | Hydrophobic | 0.35 | View |
H-R | H-R | Y58 | P384 | Y58 | P384 | Hydrophobic | Hydrophobic | 0.26 | View |
H-R | H-R | Y103 | F392 | Y103 | F392 | Hydrophobic | Hydrophobic | 0.3 | View |
H-R | H-R | Y103 | L390 | Y103 | L390 | Hydrophobic | Hydrophobic | 0.44 | View |
H-R | H-R | Y58 | F377 | Y58 | F377 | Hydrophobic | Hydrophobic | 0.98 | View |
H-R | H-R | D56 | Y369 | D56 | Y369 | Hydrophobic | Hydrophobic | 0.18 | View |
H-R | H-R | A54 | Y369 | A54 | Y369 | Hydrophobic | Hydrophobic | 0.94 | View |
Protein | Chains | Residue1 | Residue2 | Contact types | Distance | Contact |
---|---|---|---|---|---|---|
7L0N_africa_mut | H-R | Y58 | F377 | Aromatic Stacking | 5.94 | View |
7L0N_africa_mut | H-R | Y58 | F377 | Hydrophobic | 4.08 | View |
7L0N_africa_mut | H-R | Y58 | F377 | Hydrophobic | 4.33 | View |
7L0N_africa_mut | H-R | S100 | K386 | Hydrogen Bonds | 3.30 | View |
7L0N_africa_mut | H-R | Y105 | K386 | Hydrophobic | 4.36 | View |
7L0N_africa_mut | H-R | Y105 | K386 | Hydrophobic | 4.48 | View |
Residue Match Frequency | View |
---|---|
GLU | |
ALA | |
TYR | |
THR | |
LEU | |
SER | |
PHE | |
GLY | |
MET | |
PRO | |
LYS | |
VAL | |
HIS | |
ILE | |
CYS | |
ARG | |
GLN | |
ASP | |
ASN | |
TRP |